RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 YOD1Q5VVQ6 348 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 PRAMEF13Q5VWM6 474 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 GALNT17Q6IS24 598 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 Q6ZNB5 142 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 USP53Q70EK8 1073 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 CEP57Q86XR8 500 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 RAB11FIP4Q86YS3 637 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 JAMLQ86YT9 394 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 CCDC83Q8IWF9 413 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 SRBD1Q8N5C6 995 aaKnown RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 FAM184AQ8NB25 1140 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 SMG8Q8ND04 991 aaKnown RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 CCDC148Q8NFR7 591 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 SHKBP1Q8TBC3 707 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 CHAC2Q8WUX2 184 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 RFFLQ8WZ73 363 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 SGF29Q96ES7 293 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 VCPIP1Q96JH7 1222 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 CDHR1Q96JP9 859 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 ZNF668Q96K58 619 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 CCNL2Q96S94 520 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 MMS19Q96T76 1030 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 AARSD1Q9BTE6 412 aaKnown RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 RUSC1Q9BVN2 902 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.28□□□□□ -1.24
LDHA-223ENST00000545215 PSTPIP2Q9H939 334 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 ASCL3Q9NQ33 180 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 BCCIPQ9P287 314 aaKnown RBP eCLIP7.28□□□□□ -1.24
LDHA-223ENST00000545215 APEX2Q9UBZ4 518 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 CLCA2Q9UQC9 943 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 SMC3Q9UQE7 1217 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 ARHGEF17Q96PE2 2063 aaPredicted RBP7.28□□□□□ -1.24
LDHA-223ENST00000545215 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
LDHA-223ENST00000545215 hCG_1642624A0A1W2PR95 340 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 SPDYE3A6NKU9 549 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 MEIS2O14770 477 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 MPOP05164 745 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 ITGAVP06756 1048 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 GNA11P29992 359 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 LSSP48449 732 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 CDR1P51861 262 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 PPP2R2AP63151 447 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 TRIM29Q14134 588 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 TBR1Q16650 682 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 WDR45BQ5MNZ6 344 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 FAM171A1Q5VUB5 890 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 CAPRIN2Q6IMN6 1127 aaKnown RBP7.27□□□□□ -1.24
LDHA-223ENST00000545215 IQCEQ6IPM2 695 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 HEATR3Q7Z4Q2 680 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 ZNF227Q86WZ6 799 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 SCUBE1Q8IWY4 988 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 TCEAL8Q8IYN2 117 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 CCDC33Q8N5R6 958 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 NECAB1Q8N987 351 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 NSUN7Q8NE18 718 aaKnown RBP7.27□□□□□ -1.24
LDHA-223ENST00000545215 ZNF461Q8TAF7 563 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 BICD2Q8TD16 824 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 HMGB4Q8WW32 186 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 CD101Q93033 1021 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 ISL2Q96A47 359 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 ZNF512Q96ME7 567 aaPredicted RBP7.27□□□□□ -1.24
LDHA-223ENST00000545215 CLUHP3Q96NS8 147 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 MAP7D2Q96T17 732 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 SLC26A6Q9BXS9 759 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 CAAP1Q9H8G2 361 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 UBN1Q9NPG3 1134 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 THSD1Q9NS62 852 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 MIOSQ9NXC5 875 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 BARHL2Q9NY43 387 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 ORC3Q9UBD5 711 aaPredicted RBP7.27□□□□□ -1.24
LDHA-223ENST00000545215 SLC9A2Q9UBY0 812 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 AP4E1Q9UPM8 1137 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 PIN4Q9Y237 131 aaKnown RBP7.27□□□□□ -1.24
LDHA-223ENST00000545215 ATP8A1Q9Y2Q0 1164 aa7.27□□□□□ -1.24
LDHA-223ENST00000545215 UBE4BO95155 1302 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 TRBV23-1A0A0A0MS06 115 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 IGKV6D-21A0A0A0MT36 114 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 ARL5CA6NH57 179 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 K7EQS6 105 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 PRRG1O14668 218 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 HNRNPRO43390 633 aaKnown RBP7.27□□□□□ -1.25
LDHA-223ENST00000545215 ABLIM3O94929 683 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 TIAF1O95411 115 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 LARGE1O95461 756 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 S100BP04271 92 aaPredicted RBP7.27□□□□□ -1.25
LDHA-223ENST00000545215 AMPD1P23109 780 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 GJA4P35212 333 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 UQCRFS1P47985 274 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 ACADVLP49748 655 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 CDKN1CP49918 316 aaPredicted RBP7.27□□□□□ -1.25
LDHA-223ENST00000545215 ACTR2P61160 394 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 GABREP78334 506 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 SOX4Q06945 474 aaPredicted RBP7.27□□□□□ -1.25
LDHA-223ENST00000545215 DNAJC3Q13217 504 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 MTMR1Q13613 665 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 UBE2SQ16763 222 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 ANKRD39Q53RE8 183 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 EFCAB12Q6NXP0 572 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 TIPARPQ7Z3E1 657 aaKnown RBP7.27□□□□□ -1.25
LDHA-223ENST00000545215 FMR1NBQ8N0W7 255 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms