RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TRIM68Q6AZZ1 485 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 RBM43Q6ZSC3 357 aaKnown RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 CCDC186Q7Z3E2 898 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 PIGZQ86VD9 579 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 IRF2BP1Q8IU81 584 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ARHGEF19Q8IW93 802 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ARHGAP18Q8N392 663 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 UBR7Q8N806 425 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 CDK5RAP1Q96SZ6 601 aaKnown RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 FAM129BQ96TA1 746 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 TUBGCP2Q9BSJ2 902 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 CRACR2AQ9BSW2 395 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 CCSER2Q9H7U1 834 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ECT2Q9H8V3 914 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 LMAN1LQ9HAT1 526 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 LRRC4Q9HBW1 653 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 HPS4Q9NQG7 708 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 ANO10Q9NW15 660 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 SPATA6Q9NWH7 488 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-224ENST00000544990 TBC1D14Q9P2M4 693 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 SH3BP1Q9Y3L3 701 aa7.75□□□□□ -1.17
CPSF7-224ENST00000544990 F5P12259 2224 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 COL4A3Q01955 1670 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 A0A1W2PQH9 124 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 E2F8A0AVK6 867 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 SHISA7A6NL88 538 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 KCNJ18B7U540 433 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 RNF225M0QZC1 329 aaPredicted RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 O00370 1275 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 PES1O00541 588 aaKnown RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 MED7O43513 233 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 SETSIPP0DME0 302 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 CHRNB1P11230 501 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 RARGP13631 454 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 KRT5P13647 590 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 ARSAP15289 507 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 SLC9A1P19634 815 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 EEF1GP26641 437 aaKnown RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 TKTL1P51854 596 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 GRSF1Q12849 480 aaKnown RBP eCLIP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 FZD5Q13467 585 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 KCNJ12Q14500 433 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 PPP2R5DQ14738 602 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 PON2Q15165 354 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 VWA3BQ502W6 1294 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 RAB41Q5JT25 222 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 KLHDC10Q6PID8 442 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 TRIM65Q6PJ69 517 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 LCLAT1Q6UWP7 414 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 GPRIN1Q7Z2K8 1008 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 TTC30AQ86WT1 665 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 SYNPOQ8N3V7 929 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF276Q8N554 614 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 RBBP8NLQ8NC74 664 aaPredicted RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 ANKRD20A12PQ8NF67 263 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 RIN3Q8TB24 985 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 UBA3Q8TBC4 463 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 ENOX1Q8TC92 643 aaKnown RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 KAT5Q92993 513 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 OTUB2Q96DC9 234 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 CHRDQ9H2X0 955 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 NDST4Q9H3R1 872 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 SAMSN1Q9NSI8 373 aaKnown RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 SMPD4Q9NXE4 827 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 CLIC5Q9NZA1 410 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 CFAP97Q9P2B7 532 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 APEX2Q9UBZ4 518 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 NAGPAQ9UK23 515 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 LSM7Q9UK45 103 aaKnown RBP7.74□□□□□ -1.17
CPSF7-224ENST00000544990 NFE2L3Q9Y4A8 694 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 WNT6Q9Y6F9 365 aa7.74□□□□□ -1.17
CPSF7-224ENST00000544990 M0QYV0 167 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 TRDMT1O14717 391 aaKnown RBP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 ATXN7O15265 892 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 CYP26A1O43174 497 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 ZBED1O96006 694 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 DRD1P21728 446 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 PON1P27169 355 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 GJA4P35212 333 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 USP8P40818 1118 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 CCR3P51677 355 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 COG7P83436 770 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 ZXDBP98169 803 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 PTSQ03393 145 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 STX1AQ16623 288 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 ARHGAP44Q17R89 818 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 HSP90AA4PQ58FG1 418 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 TCP11X2Q5H9J9 407 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 TMEM196Q5HYL7 178 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 C10orf120Q5SQS8 335 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 SAMD5Q5TGI4 173 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 BTBD8Q5XKL5 378 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 PM20D1Q6GTS8 502 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 ZC3H14Q6PJT7 736 aaKnown RBP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 TXNDC11Q6PKC3 985 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 RSRC2Q7L4I2 434 aaKnown RBP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 ADGRG2Q8IZP9 1017 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 SIX6OS1Q8N1H7 587 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms