RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 APOL6Q9BWW8 343 aa18.68■□□□□ 0.58
TNFAIP1-202ENST00000544907 RNF39Q9H2S5 420 aa18.68■□□□□ 0.58
TNFAIP1-202ENST00000544907 ETNK1Q9HBU6 452 aa18.68■□□□□ 0.58
TNFAIP1-202ENST00000544907 ZC3H7BQ9UGR2 993 aaKnown RBP18.68■□□□□ 0.58
TNFAIP1-202ENST00000544907 TTLL3Q9Y4R7 772 aa18.68■□□□□ 0.58
TNFAIP1-202ENST00000544907 KRT37O76014 449 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 PTPN1P18031 435 aaKnown RBP18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 LHX1P48742 406 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 NEK3P51956 506 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 DNAJC3Q13217 504 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 EFTUD2Q15029 972 aaKnown RBP eCLIP18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 SETDB1Q15047 1291 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 KBTBD12Q3ZCT8 623 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 NCBP2-AS2Q69YL0 99 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 HEATR6Q6AI08 1181 aaKnown RBP18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 RPAINQ86UA6 219 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 PARP9Q8IXQ6 854 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 ZNF276Q8N554 614 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 FITM2Q8N6M3 262 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 CLEC4CQ8WTT0 213 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 TFB1MQ8WVM0 346 aaKnown RBP18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 NPY6RQ99463 290 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 RRN3Q9NYV6 651 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 DTLQ9NZJ0 730 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 GRID1Q9ULK0 1009 aa18.67■□□□□ 0.58
TNFAIP1-202ENST00000544907 A0A0A0MRY4 1105 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 C9IYK1 514 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 H3BRJ5 948 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 M0QZ92 97 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 PTGESO14684 152 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 OPHN1O60890 802 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 STK10O94804 968 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 APOEP02649 317 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 APRTP07741 180 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 TFE3P19532 575 aaPredicted RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 CNTFP26441 200 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 GJA9P57773 515 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 NCALDP61601 193 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 GBE1Q04446 702 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 SWT1Q5T5J6 900 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 KCNT2Q6UVM3 1135 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 FAM228AQ86W67 206 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 ECHDC2Q86YB7 292 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 DEFB106AQ8N104 65 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 TCP10LQ8TDR4 215 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 NTAN1Q96AB6 310 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 SPATA13Q96N96 652 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 KLK14Q9P0G3 267 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 TRIP11Q15643 1979 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 CYB561D2O14569 222 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 KLF11O14901 512 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 CHUKO15111 745 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 DUSP11O75319 330 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 TGDSO95455 350 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 SNRPAP09012 282 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 AKR1A1P14550 325 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 TKTP29401 623 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 ETV4P43268 484 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 GLUD2P49448 558 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 SERPINB9P50453 376 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 NRLP54845 237 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 NKX3-2P78367 333 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 MRPS6P82932 125 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 SLC10A2Q12908 348 aaPredicted RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 FYB2Q5VWT5 728 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 TWF2Q6IBS0 349 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 ZNF449Q6P9G9 518 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 RSPH3Q86UC2 560 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 OSTM1Q86WC4 334 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 AGGF1Q8N302 714 aaeCLIP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 CCDC185Q8N715 623 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 ARRDC4Q8NCT1 418 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 GSDMBQ8TAX9 411 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 HTR3CQ8WXA8 447 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 PGAP3Q96FM1 320 aaPredicted RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 SIGLEC10Q96LC7 697 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 EBNA1BP2Q99848 306 aaKnown RBP18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 ADAM33Q9BZ11 813 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 TXLNGQ9NUQ3 528 aa18.66■□□□□ 0.58
TNFAIP1-202ENST00000544907 LPXNO60711 386 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 RPL9P32969 192 aaKnown RBP18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 HCAR3P49019 387 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 SULT1E1P49888 294 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 ELF3P78545 371 aaPredicted RBP18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 MGAT5Q09328 741 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 SCAPQ12770 1279 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 NAB1Q13506 487 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 PAFAH1B3Q15102 231 aaKnown RBP18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 PDK1Q15118 436 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 PRKD1Q15139 912 aaPredicted RBP18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 SNCBQ16143 134 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 FAM133BQ5BKY9 247 aaKnown RBP18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 ZNF618Q5T7W0 954 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 ZNF534Q76KX8 674 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 ASRGL1Q7L266 308 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 CCDC110Q8TBZ0 833 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 RMDN2Q96LZ7 410 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 LPIN3Q9BQK8 851 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 NAT9Q9BTE0 207 aa18.65■□□□□ 0.58
TNFAIP1-202ENST00000544907 ECT2Q9H8V3 914 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms