RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 DTLQ9NZJ0 730 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 SENP1Q9P0U3 644 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 ARHGEF37A1IGU5 675 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 HACD1B0YJ81 288 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 CREB3O43889 395 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 GCATO75600 419 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 CYP11A1P05108 521 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 APRTP07741 180 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 AIF1P55008 147 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 INTS6LQ5JSJ4 861 aaKnown RBP17.67■□□□□ 0.42
PTPRO-209ENST00000543886 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
PTPRO-209ENST00000543886 CCDC33Q8N5R6 958 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 PPM1EQ8WY54 764 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 SEC16BQ96JE7 1060 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 RHOBTB2Q9BYZ6 727 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 TRABDQ9H4I3 376 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 TMEM30AQ9NV96 361 aa17.67■□□□□ 0.42
PTPRO-209ENST00000543886 LTFP02788 710 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 NCAM1P13591 858 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 MAGEA6P43360 314 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 EFTUD2Q15029 972 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPRO-209ENST00000543886 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
PTPRO-209ENST00000543886 LRRC34Q8IZ02 419 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 RAET1EQ8TD07 263 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 RSPH1Q8WYR4 309 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 CAPNS2Q96L46 248 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 SMC6Q96SB8 1091 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 SLC9A7Q96T83 725 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 ETNK1Q9HBU6 452 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 MLXIPLQ9NP71 852 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 TMPRSS4Q9NRS4 437 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 MFHAS1Q9Y4C4 1052 aa17.66■□□□□ 0.42
PTPRO-209ENST00000543886 FAM47DPA6NHR8 397 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 C9IYK1 514 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 HHLA1C9JL84 531 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 ANKRD65E5RJM6 399 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 M0QZQ0 153 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 EEF2KO00418 725 aaKnown RBP17.65■□□□□ 0.42
PTPRO-209ENST00000543886 MFSD11O43934 449 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 SPAG6O75602 509 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 DGKIO75912 1065 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 FYNP06241 537 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 STX2P32856 288 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 FAM182AQ5T1J6 154 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 OVOS1Q6IE37 1185 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 FAM171BQ6P995 826 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 THEM5Q8N1Q8 247 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 GDAP1Q8TB36 358 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 ADAM32Q8TC27 787 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 CD99L2Q8TCZ2 262 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 OLFM3Q96PB7 478 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 PAFAH2Q99487 392 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 FERMT1Q9BQL6 677 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 CSNK1G1Q9HCP0 422 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 RRN3Q9NYV6 651 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 TEX264Q9Y6I9 313 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 MOXD2PA6NHM9 499 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 KBTBD13C9JR72 458 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 CKBP12277 381 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 BDNFP23560 247 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 YY1P25490 414 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 MSH2P43246 934 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 YWHAGP61981 247 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTPRO-209ENST00000543886 MPP2Q14168 576 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 MAPRE1Q15691 268 aaKnown RBP17.65■□□□□ 0.42
PTPRO-209ENST00000543886 TTC31Q49AM3 519 aaPredicted RBP17.65■□□□□ 0.42
PTPRO-209ENST00000543886 DCLRE1AQ6PJP8 1040 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 ZNF598Q86UK7 904 aaKnown RBP17.65■□□□□ 0.42
PTPRO-209ENST00000543886 IGDCC3Q8IVU1 814 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 HTR3CQ8WXA8 447 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 NTAN1Q96AB6 310 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 CABS1Q96KC9 395 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 CYTH2Q99418 400 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 DMAP1Q9NPF5 467 aaPredicted RBP17.65■□□□□ 0.42
PTPRO-209ENST00000543886 DDIT4Q9NX09 232 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 SAMD15Q9P1V8 674 aa17.65■□□□□ 0.42
PTPRO-209ENST00000543886 SF3B1O75533 1304 aaKnown RBP eCLIP17.64■□□□□ 0.41
PTPRO-209ENST00000543886 DNAH12Q6ZR08 3092 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 AVILO75366 819 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 STK10O94804 968 aaKnown RBP17.64■□□□□ 0.41
PTPRO-209ENST00000543886 ADRA1BP35368 520 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 TSPY1Q01534 308 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 GLB1LQ6UWU2 654 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 CD300LGQ6UXG3 332 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 RFX8Q6ZV50 586 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 MCUQ8NE86 351 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 IRGQQ8WZA9 623 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 SGSM3Q96HU1 749 aa17.64■□□□□ 0.41
PTPRO-209ENST00000543886 SMG5Q9UPR3 1016 aaKnown RBP17.64■□□□□ 0.41
PTPRO-209ENST00000543886 KIF3CO14782 793 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 METTL18O95568 372 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 IFT88Q13099 833 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 CBLBQ13191 982 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 ARL13BQ3SXY8 428 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 OTUD6BQ8N6M0 293 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 CKAP2Q8WWK9 683 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 CFAP36Q96G28 342 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 SUSD3Q96L08 255 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 DHRS4Q9BTZ2 278 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 TRPV6Q9H1D0 765 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms