RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 MEI4A8MW99 385 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 CYBBP04839 570 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 HSP90AA1P07900 732 aaKnown RBP23.73■■□□□ 1.39
CDKN3-207ENST00000543789 NCAM1P13591 858 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 CMA1P23946 247 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 OXTRP30559 389 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 ENPEPQ07075 957 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 ZNF394Q53GI3 561 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 ARHGAP18Q8N392 663 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 SIPA1Q96FS4 1042 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 MMRN2Q9H8L6 949 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 ELOVL2Q9NXB9 296 aa23.73■■□□□ 1.39
CDKN3-207ENST00000543789 AGO1Q9UL18 857 aaKnown RBP23.73■■□□□ 1.39
CDKN3-207ENST00000543789 PFKFB1P16118 471 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 TPMTP51580 245 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 RING1Q06587 406 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 LRSAM1Q6UWE0 723 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 ANKS1BQ7Z6G8 1248 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 DENND1CQ8IV53 801 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 NAXDQ8IW45 347 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 FAM186BQ8IYM0 893 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 PRCCQ92733 491 aaPredicted RBP23.72■■□□□ 1.39
CDKN3-207ENST00000543789 CCDC47Q96A33 483 aaKnown RBP23.72■■□□□ 1.39
CDKN3-207ENST00000543789 PIWIL1Q96J94 861 aaKnown RBP23.72■■□□□ 1.39
CDKN3-207ENST00000543789 UBXN6Q9BZV1 441 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 MIR1-1HGQ9H1L0 117 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 MARCH2Q9P0N8 246 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 STRIP2Q9ULQ0 834 aa23.72■■□□□ 1.39
CDKN3-207ENST00000543789 KCNJ18B7U540 433 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 TIMM44O43615 452 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 RPL13P26373 211 aaKnown RBP23.71■■□□□ 1.39
CDKN3-207ENST00000543789 PSMC2P35998 433 aaKnown RBP23.71■■□□□ 1.39
CDKN3-207ENST00000543789 SPRYD3Q8NCJ5 442 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 ADAMTS14Q8WXS8 1223 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 NUP58Q9BVL2 599 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 TMEM8AQ9HCN3 771 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 LHX6Q9UPM6 363 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 PCDH15Q96QU1 1955 aa23.71■■□□□ 1.39
CDKN3-207ENST00000543789 METTL12A8MUP2 240 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 TAF4O00268 1085 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 FTH1P19P0C7X4 201 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 HOXB3P14651 431 aaPredicted RBP23.7■■□□□ 1.38
CDKN3-207ENST00000543789 GTF2H1P32780 548 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 ADAM9Q13443 819 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 PKP1Q13835 747 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 COL9A2Q14055 689 aaPredicted RBP23.7■■□□□ 1.38
CDKN3-207ENST00000543789 ZNF234Q14588 700 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 EIF4HQ15056 248 aaKnown RBP23.7■■□□□ 1.38
CDKN3-207ENST00000543789 DCAF12L1Q5VU92 463 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 RSRC2Q7L4I2 434 aaKnown RBP23.7■■□□□ 1.38
CDKN3-207ENST00000543789 CPXM2Q8N436 756 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 ZCCHC9Q8N567 271 aaKnown RBP23.7■■□□□ 1.38
CDKN3-207ENST00000543789 TTC39CQ8N584 583 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 DDI1Q8WTU0 396 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 FAXDC2Q96IV6 333 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 SLC2A11Q9BYW1 496 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 CLEC4EQ9ULY5 219 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 MAPK8IP1Q9UQF2 711 aa23.7■■□□□ 1.38
CDKN3-207ENST00000543789 AKAP13Q12802 2813 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 WDFY3Q8IZQ1 3526 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 SLC12A8A0AV02 714 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 BCAT2O15382 392 aaPredicted RBP23.69■■□□□ 1.38
CDKN3-207ENST00000543789 RHOBTB3O94955 611 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 CAPNS1P04632 268 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 ACADMP11310 421 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 YWHAGP61981 247 aaKnown RBP eCLIP23.69■■□□□ 1.38
CDKN3-207ENST00000543789 KRT39Q6A163 491 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 PIGZQ86VD9 579 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 HSCBQ8IWL3 235 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 PNPLA1Q8N8W4 532 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 TMEM176AQ96HP8 235 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 CIPCQ9C0C6 399 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 HPSEQ9Y251 543 aa23.69■■□□□ 1.38
CDKN3-207ENST00000543789 IGLV3-19P01714 112 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 SYKP43405 635 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 COPAP53621 1224 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 SLC8A3P57103 927 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 ARID5AQ03989 594 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 SCAPQ12770 1279 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 RAB41Q5JT25 222 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 IL27RAQ6UWB1 636 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 PROSER1Q86XN7 944 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 SLC4A11Q8NBS3 891 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 RBBP8NLQ8NC74 664 aaPredicted RBP23.68■■□□□ 1.38
CDKN3-207ENST00000543789 SORCS1Q8WY21 1168 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 SEMA4DQ92854 862 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 GAREM1Q9H706 876 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 CISHQ9NSE2 258 aa23.68■■□□□ 1.38
CDKN3-207ENST00000543789 APOBEC2Q9Y235 224 aaKnown RBP23.68■■□□□ 1.38
CDKN3-207ENST00000543789 CBFA2T3O75081 653 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 EPHX1P07099 455 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 PRR29P0C7W0 189 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 PRKCHP24723 683 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 RAD23BP54727 409 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 TMEM215Q68D42 235 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 ARHGAP17Q68EM7 881 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 SERPINA13PQ6UXR4 307 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 CCNI2Q6ZMN8 369 aaPredicted RBP23.67■■□□□ 1.38
CDKN3-207ENST00000543789 GLRX5Q86SX6 157 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 GUF1Q8N442 669 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms