RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 RRS1Q15050 365 aaKnown RBP9.15□□□□□ -0.94
VPS13D-212ENST00000543766 TEAD4Q15561 434 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 XKR9Q5GH70 373 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 AARS2Q5JTZ9 985 aaKnown RBP9.15□□□□□ -0.94
VPS13D-212ENST00000543766 C11orf88Q6PI97 169 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 BLOC1S2Q6QNY1 142 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ELMOD1Q8N336 334 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 SLC43A2Q8N370 569 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 FNDC8Q8TC99 324 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 CAVIN3Q969G5 261 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 COX4I2Q96KJ9 171 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ZIM3Q96PE6 472 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 MED15Q96RN5 788 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 EYA3Q99504 573 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 C17orf80Q9BSJ5 609 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 BCL2L14Q9BZR8 327 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 MAGEF1Q9HAY2 307 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 LZTFL1Q9NQ48 299 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 PIAS3Q9Y6X2 628 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 WDR17Q8IZU2 1322 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 SPDYE2BA6NHP3 402 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ACOD1A6NK06 481 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
VPS13D-212ENST00000543766 PRAMEF12O95522 483 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 SPDYE6P0CI01 402 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 FBLN1P23142 703 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ALDH1A3P47895 512 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 P2RX3P56373 397 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 MTMR1Q13613 665 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 SPDYE2Q495Y8 402 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 CYP20A1Q6UW02 462 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 BNIPLQ7Z465 357 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 WASF1Q92558 559 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 LBHD1Q9BQE6 289 aaPredicted RBP9.15□□□□□ -0.94
VPS13D-212ENST00000543766 TMEM120AQ9BXJ8 343 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 AGXT2Q9BYV1 514 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 RIBC2Q9H4K1 309 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 IL1RAPL2Q9NP60 686 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ASNSD1Q9NWL6 643 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ADD3Q9UEY8 706 aaKnown RBP9.15□□□□□ -0.94
VPS13D-212ENST00000543766 SLC39A10Q9ULF5 831 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 M0R3H8 397 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 PDPK1O15530 556 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 GJB3O75712 270 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 BMP1P13497 986 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 MFAP3P55082 362 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 ANGPT1Q15389 498 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 TRAPPC3LQ5T215 181 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 ARHGEF16Q5VV41 709 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 SLFN13Q68D06 897 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 R3HCC1LQ7Z5L2 792 aaKnown RBP9.15□□□□□ -0.95
VPS13D-212ENST00000543766 DDX54Q8TDD1 881 aaKnown RBP9.15□□□□□ -0.95
VPS13D-212ENST00000543766 DEPDC7Q96QD5 511 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 MMS19Q96T76 1030 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 ELAC2Q9BQ52 826 aaKnown RBP9.15□□□□□ -0.95
VPS13D-212ENST00000543766 TMEM60Q9H2L4 133 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 HSFX1Q9UBD0 423 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 ZMYM5Q9UJ78 669 aa9.15□□□□□ -0.95
VPS13D-212ENST00000543766 NPHP3-ACAD11A0A0J9YXS1 232 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 KCNN4O15554 427 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PPIP5K2O43314 1243 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 MITFO75030 526 aaPredicted RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 OAZ2O95190 189 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 EIF2S1P05198 315 aaKnown RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PDGFRAP16234 1089 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 ARF4P18085 180 aaPredicted RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CMA1P23946 247 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CCR4P51679 360 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CYP4F2P78329 520 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 GUCY1A3Q02108 690 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 DSC2Q02487 901 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 KCNC4Q03721 635 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CYP4F3Q08477 520 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 TRIM32Q13049 653 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 TXNRD1Q16881 649 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 C1orf141Q5JVX7 400 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SLC30A10Q6XR72 485 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 EPM2AIP1Q7L775 607 aaPredicted RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 TIPARPQ7Z3E1 657 aaKnown RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PRUNE1Q86TP1 453 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 FAM124AQ86V42 546 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 Q8N9G6 341 aaPredicted RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SLC4A11Q8NBS3 891 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 SLC17A8Q8NDX2 589 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CCDC120Q96HB5 630 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 HEXIM2Q96MH2 286 aaKnown RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 RIPOR3Q96MK2 946 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 UCN2Q96RP3 112 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 RIMS4Q9H426 269 aaPredicted RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 NCOR1P1Q9H4R4 102 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 TRPM5Q9NZQ8 1165 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 PPARGC1AQ9UBK2 798 aaKnown RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 CAB39Q9Y376 341 aaPredicted RBP9.14□□□□□ -0.95
VPS13D-212ENST00000543766 COL15A1P39059 1388 aa9.14□□□□□ -0.95
VPS13D-212ENST00000543766 MYH13Q9UKX3 1938 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms