RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ADCY8P40145 1251 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 ARL4AP40617 200 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 ZNF135P52742 658 aaPredicted RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 EIF4EBP2Q13542 120 aaPredicted RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 ARL13BQ3SXY8 428 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 SWT1Q5T5J6 900 aaKnown RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 KCNT2Q6UVM3 1135 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 TAC4Q86UU9 113 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 EDEM1Q92611 657 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 CEP295NLQ96MC4 621 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 PGLYRP2Q96PD5 576 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 SMOC2Q9H3U7 446 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 CWC15Q9P013 229 aaKnown RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 SAE1Q9UBE0 346 aaPredicted RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 SYNJ2BP-COX16A0A087WUM0 186 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 SGK1O00141 431 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 RTN3O95197 1032 aaPredicted RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 SOD2P04179 222 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 NR2C2P49116 596 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 ROR1Q01973 937 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 SEMA3BQ13214 749 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 TRIP13Q15645 432 aaPredicted RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 PSMD5Q16401 504 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 DDR2Q16832 855 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 BTBD8Q5XKL5 378 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 PRSS55Q6UWB4 352 aaPredicted RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 NPNTQ6UXI9 565 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 RNF19BQ6ZMZ0 732 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 SCD5Q86SK9 330 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 ADAM32Q8TC27 787 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 RNF139Q8WU17 664 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 TMEM121Q9BTD3 319 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 COX16Q9P0S2 106 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 ALPK3Q96L96 1907 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 CFAP69A5D8W1 941 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 DNALI1O14645 258 aaPredicted RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 RBP3P10745 1247 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 GOT1P17174 413 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 HSD17B3P37058 310 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 GPR15P49685 360 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 ITGA8P53708 1063 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 ARPP19P56211 112 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 RPL10AP62906 217 aaKnown RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 DHX9Q08211 1270 aaKnown RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 XRCC4Q13426 336 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 BTG3Q14201 252 aaPredicted RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 CFAP58Q5T655 872 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 IZUMO3Q5VZ72 239 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 MSANTD2Q6P1R3 559 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 C1orf228Q6PIY5 440 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 MON1AQ86VX9 555 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 IQCKQ8N0W5 287 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 PYROXD2Q8N2H3 581 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 GOLGA6L1Q8N7Z2 621 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 COLGALT1Q8NBJ5 622 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 ATAD1Q8NBU5 361 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 FBXO22Q8NEZ5 403 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 RSAD2Q8WXG1 361 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 FOXP3Q9BZS1 431 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.67□□□□□ -0.86
GNE-206ENST00000543356 HSFX1Q9UBD0 423 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 CDY1Q9Y6F8 540 aa9.67□□□□□ -0.86
GNE-206ENST00000543356 MRPL42Q9Y6G3 142 aaKnown RBP9.67□□□□□ -0.86
GNE-206ENST00000543356 GREB1Q4ZG55 1949 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 CEP350Q5VT06 3117 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 AGPSO00116 658 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 PPP1R12AO14974 1030 aaPredicted RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 IRAK2O43187 625 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 HCAR3P49019 387 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 DSG1Q02413 1049 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 PPIGQ13427 754 aaKnown RBP eCLIP9.66□□□□□ -0.86
GNE-206ENST00000543356 DPYSQ14117 519 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 SLMAPQ14BN4 828 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 UAP1Q16222 522 aaPredicted RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 P3H1Q32P28 736 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 BRMS1LQ5PSV4 323 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 SPOUT1Q5T280 376 aaKnown RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 NCBP2-AS2Q69YL0 99 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 HIBCHQ6NVY1 386 aaPredicted RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 LRIG3Q6UXM1 1119 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 CDKL3Q8IVW4 592 aaPredicted RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 TTC9BQ8N6N2 239 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 GLIS1Q8NBF1 620 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 RIN2Q8WYP3 895 aaPredicted RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 RTP4Q96DX8 246 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 ARHGEF4Q9NR80 690 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 ARHGEF38Q9NXL2 777 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 ANAPC5Q9UJX4 755 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 A0A1W2PQH9 124 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 BCLAF3A2AJT9 711 aaKnown RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 WDR27A2RRH5 827 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 H3BQF6 201 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 ACRP10323 421 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 STIP1P31948 543 aaKnown RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 VPS41P49754 854 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 GDF10P55107 478 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 IFRD2Q12894 506 aaPredicted RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 SDHAF4Q5VUM1 108 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 DARS2Q6PI48 645 aaKnown RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 CEP128Q6ZU80 1094 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms