RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.8
TCF4-208ENST00000543082 DARS2Q6PI48 645 aaKnown RBP10.02□□□□□ -0.8
TCF4-208ENST00000543082 BNC2Q6ZN30 1099 aaPredicted RBP10.02□□□□□ -0.8
TCF4-208ENST00000543082 ADGRF2Q8IZF7 708 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 RIN3Q8TB24 985 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 BORCS5Q969J3 196 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 CORO1BQ9BR76 489 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 SMYD2Q9NRG4 433 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 VPS45Q9NRW7 570 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 PAK5Q9P286 719 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 SSUH2Q9Y2M2 353 aa10.02□□□□□ -0.8
TCF4-208ENST00000543082 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.81
TCF4-208ENST00000543082 FAM159BA6NKW6 160 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 ZNF701M0R085 212 aaPredicted RBP10.02□□□□□ -0.81
TCF4-208ENST00000543082 HNRNPDLO14979 420 aaKnown RBP10.02□□□□□ -0.81
TCF4-208ENST00000543082 DCXO43602 365 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 UGT1A9O60656 530 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 AVILO75366 819 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 H6PDO95479 791 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 PDGFRBP09619 1106 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 ZNF12P17014 697 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 ZNF24P17028 368 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 TNNI1P19237 187 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 HMOX2P30519 316 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 DPYSQ14117 519 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 SMTNL2Q2TAL5 461 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 MROH9Q5TGP6 573 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 TDRD10Q5VZ19 366 aaKnown RBP10.02□□□□□ -0.81
TCF4-208ENST00000543082 SMIM5Q71RC9 77 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 PHTF2Q8N3S3 785 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 GALNT4Q8N4A0 578 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 TMEM35BQ8NCS4 154 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 CERKQ8TCT0 537 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 HM13Q8TCT9 377 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 KBTBD7Q8WVZ9 684 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 ZNF606Q8WXB4 792 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 SORT1Q99523 831 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 MMP19Q99542 508 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 KIFC3Q9BVG8 833 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 ZNF518BQ9C0D4 1074 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 UGT1A7Q9HAW7 530 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 UGT1A10Q9HAW8 530 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 UGT1A8Q9HAW9 530 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 PNPOQ9NVS9 261 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 MYRFQ9Y2G1 1151 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 WDR81Q562E7 1941 aa10.02□□□□□ -0.81
TCF4-208ENST00000543082 TMEM247A6NEH6 219 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 EXTL3O43909 919 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 ZMPSTE24O75844 475 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 BMP10O95393 424 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 GSRP00390 522 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 C4BPAP04003 597 aaKnown RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 ALDH2P05091 517 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 HOXD12P35452 270 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 STT3AP46977 705 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 NUDT2P50583 147 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 CNTN2Q02246 1040 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 TRPC3Q13507 836 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 PCLAFQ15004 111 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 PDK1Q15118 436 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 NOMO1Q15155 1222 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 METTL21CQ5VZV1 264 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 LMBRD2Q68DH5 695 aaPredicted RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 C16orf46Q6P387 395 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 HHIPL2Q6UWX4 724 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 CCDC80Q76M96 950 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 LILRA2Q8N149 483 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 GSDMBQ8TAX9 411 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 SPATA18Q8TC71 538 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 DEPDC1BQ8WUY9 529 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 ATP2A3Q93084 1043 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 FAM84AQ96KN4 292 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 CSRNP1Q96S65 589 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 HNRNPABQ99729 332 aaKnown RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 PKP2Q99959 881 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 BRD8Q9H0E9 1235 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 APOBEC3GQ9HC16 384 aaKnown RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 CYP26B1Q9NR63 512 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 MRPL11Q9Y3B7 192 aaKnown RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 HMX2A2RU54 273 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 H3BNH8 94 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 ZNF195O14628 629 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 PLIN3O60664 434 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 LRCH4O75427 683 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 VNN1O95497 513 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 C8BP07358 591 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 FUT4P22083 530 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 HALP42357 657 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 HARS2P49590 506 aaKnown RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 ZNF132P52740 706 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 THOP1P52888 689 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 KCNQ4P56696 695 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 ABCE1P61221 599 aaKnown RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 ACAP1Q15027 740 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 CRY2Q49AN0 593 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 XKR9Q5GH70 373 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 N4BP2L1Q5TBK1 243 aaPredicted RBP10.01□□□□□ -0.81
TCF4-208ENST00000543082 UNC5AQ6ZN44 842 aa10.01□□□□□ -0.81
TCF4-208ENST00000543082 NIPA1Q7RTP0 329 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms