RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	PROSC	O94903	275 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CKM	P06732	381 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MBL2	P11226	248 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	IL1R2	P27930	398 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SDC4	P31431	198 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SULT1E1	P49888	294 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ATP11A	P98196	1134 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZP2	Q05996	745 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	NNT	Q13423	1086 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PUS10	Q3MIT2	529 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ARHGAP15	Q53QZ3	475 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	NADSYN1	Q6IA69	706 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	DCUN1D2	Q6PH85	259 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	VIT	Q6UXI7	678 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RSRC2	Q7L4I2	434 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	STRADA	Q7RTN6	431 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	OTOP3	Q7RTS5	596 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZDHHC14	Q8IZN3	488 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SH3RF2	Q8TEC5	729 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM172A	Q8WUF8	416 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RSAD2	Q8WXG1	361 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ASIC4	Q96FT7	647 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	GOLPH3	Q9H4A6	298 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MRPL47	Q9HD33	250 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	OLA1	Q9NTK5	396 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TDP1	Q9NUW8	608 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	DDIT4	Q9NX09	232 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ARHGEF38	Q9NXL2	777 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CTTNBP2NL	Q9P2B4	639 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZMYM5	Q9UJ78	669 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ANAPC7	Q9UJX3	599 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TLR6	Q9Y2C9	796 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	HBS1L	Q9Y450	684 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PAXBP1	Q9Y5B6	917 aa		11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	HELZ	P42694	1942 aa	Known RBP	11.11	□□□□□ -0.63
NPIPB3-210	ENST00000542817	GRID2IP	A4D2P6	1211 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	HEPACAM2	A8MVW5	462 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ARNTL	O00327	626 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CAPN9	O14815	690 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SCAMP3	O14828	347 aa	Known RBP	11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	HMBS	P08397	361 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	GBP2	P32456	591 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	AVPR1A	P37288	418 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TAS2R40	P59535	323 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SLC25A11	Q02978	314 aa	Known RBP	11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RING1	Q06587	406 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FCHO2	Q0JRZ9	810 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	HTR3D	Q70Z44	454 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SLFN11	Q7Z7L1	901 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TADA2B	Q86TJ2	420 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RHOT2	Q8IXI1	618 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM217A	Q8IXS0	508 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZNF683	Q8IZ20	524 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CCDC185	Q8N715	623 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TPCN2	Q8NHX9	752 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RNF139	Q8WU17	664 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	GOLGA1	Q92805	767 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CD101	Q93033	1021 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ELSPBP1	Q96BH3	223 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RPGRIP1	Q96KN7	1286 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SERPINB11	Q96P15	392 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PRMT1	Q99873	361 aa	Known RBP	11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TRIM62	Q9BVG3	475 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	IRX2	Q9BZI1	471 aa	Predicted RBP	11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	LINC00597	Q9H2U6	94 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SLITRK6	Q9H5Y7	841 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM204A	Q9H8W3	233 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KCND1	Q9NSA2	647 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	OBP2A	Q9NY56	170 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RRN3	Q9NYV6	651 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CFAP97	Q9P2B7	532 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	STOML2	Q9UJZ1	356 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PRDM4	Q9UKN5	801 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	AGO1	Q9UL18	857 aa	Known RBP	11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CAPN6	Q9Y6Q1	641 aa		11.1	□□□□□ -0.63
NPIPB3-210	ENST00000542817	OTOL1	A6NHN0	477 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MYO1F	O00160	1098 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	BUB1	O43683	1085 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ECI2	O75521	394 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CCDC175	P0C221	793 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PSMA2	P25787	234 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MIP	P30301	263 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RDX	P35241	583 aa	Known RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PCK1	P35558	622 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TBX4	P57082	545 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	COG7	P83436	770 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	NME3	Q13232	169 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PPP2R5D	Q14738	602 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CDO1	Q16878	200 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM133B	Q5BKY9	247 aa	Known RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PIK3R6	Q5UE93	754 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KIAA1328	Q86T90	577 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM131B	Q86XD5	332 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ADHFE1	Q8IWW8	467 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	BBS7	Q8IWZ6	715 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CCAR2	Q8N163	923 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms