RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 DCAF12L1Q5VU92 463 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 AADACL2Q6P093 401 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 ZDHHC24Q6UX98 284 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SRRM1Q8IYB3 904 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 FAM9CQ8IZT9 166 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 ENDOVQ8N8Q3 282 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SCAIQ8N9R8 606 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 NRG4Q8WWG1 115 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CKAP2Q8WWK9 683 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SIKE1Q9BRV8 207 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CEP44Q9C0F1 390 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 TUT1Q9H6E5 874 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SEPT11Q9NVA2 429 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 ZC3H7BQ9UGR2 993 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 RASAL2Q9UJF2 1139 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 EVPLQ92817 2033 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 A0A087WZ62 844 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 MANSC4A6NHS7 340 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 GPR25O00155 361 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CDK2AP1O14519 115 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 TMCC2O75069 709 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 ATP5HO75947 161 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 ASS1P00966 412 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CST3P01034 146 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CYP1A1P04798 512 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SLC10A3P09131 477 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 UNGP13051 313 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 PORP16435 677 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 RPL21P46778 160 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 AP3M2P53677 418 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 NOP14P78316 857 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 DNAJC3Q13217 504 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 NCOA4Q13772 614 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 GRIK4Q16099 956 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CCDC14Q49A88 953 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 WASHC2DQ5SRD0 308 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 KIAA1614Q5VZ46 1190 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 RNF43Q68DV7 783 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 VSTM1Q6UX27 236 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SESTD1Q86VW0 696 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SCUBE1Q8IWY4 988 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 RHOT2Q8IXI1 618 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 RASGEF1CQ8N431 466 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 OR6J1Q8NGC5 347 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SEC14L1Q92503 715 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 STMN2Q93045 179 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 FDXACB1Q9BRP7 624 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 SPATA16Q9BXB7 569 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 FAM192AQ9GZU8 254 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 PDZD7Q9H5P4 517 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 PARVBQ9HBI1 364 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 EURLQ9NYK6 297 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 PDP2Q9P2J9 529 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 CHKBQ9Y259 395 aa8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 FAM32AQ9Y421 112 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-221ENST00000542407 BHMG1C9JSJ3 638 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 INO80B-WBP1J3KQ70 363 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 VTNP04004 478 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 TKTP29401 623 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 PHKA2P46019 1235 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF157P51786 506 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 GPC5P78333 572 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF568Q3ZCX4 644 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 WDR44Q5JSH3 913 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 PRAMEF19Q5SWL8 479 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 PPP2R2DQ66LE6 453 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 C11orf63Q6NUN7 778 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 LRRC74BQ6ZQY2 392 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CROCCP2Q86T23 111 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CDR2LQ86X02 465 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 SYCE1Q8N0S2 351 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 SPARTQ8N0X7 666 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 NMD3Q96D46 503 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 XYLT2Q9H1B5 865 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CHST12Q9NRB3 414 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 PRMT7Q9NVM4 692 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 FADS3Q9Y5Q0 445 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 NOX1Q9Y5S8 564 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CCDC162PA2VCL2 907 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 ATMINO43313 823 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 OPHN1O60890 802 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CSDE1O75534 798 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 OXSR1O95747 527 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 LMNAP02545 664 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CFHP08603 1231 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CTGFP29279 349 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 HSD17B2P37059 387 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 NR2C2P49116 596 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 TNFAIP2Q03169 654 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 GNA13Q14344 377 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 KPNB1Q14974 876 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 MTFR1Q15390 333 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CCL14Q16627 93 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 DGKDQ16760 1214 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 TAF1BQ53T94 588 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 IGSF11Q5DX21 431 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 CMPK2Q5EBM0 449 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms