RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 GJC1P36383 396 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 MAGEA10P43363 369 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 ALDH1A3P47895 512 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 ZNF135P52742 658 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 PITX1P78337 314 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 DHX34Q14147 1143 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 DPYSL3Q14195 570 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 SHHQ15465 462 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 ELF2Q15723 593 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 CCNG2Q16589 344 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 SMTNL2Q2TAL5 461 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 C9orf50Q5SZB4 431 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 C8orf74Q6P047 294 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 MSANTD2Q6P1R3 559 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 WDR93Q6P2C0 686 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 DRICH1Q6PGQ1 229 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 LILRA6Q6PI73 481 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 BBS12Q6ZW61 710 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 SND1Q7KZF4 910 aaKnown RBP eCLIP9.6□□□□□ -0.872e-19■■■■□ 22.8
LDHA-220ENST00000542179 RTL10Q7L3V2 364 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 MAATS1Q7Z4T9 603 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 MRPL43Q8N983 215 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 PDZD8Q8NEN9 1154 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 CCDC26Q8TAB7 109 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 SLC7A14Q8TBB6 771 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 SPPL3Q8TCT6 385 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 DQX1Q8TE96 717 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 TSC1Q92574 1164 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 HSPH1Q92598 858 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 EDEM1Q92611 657 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 SLCO2A1Q92959 643 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 ACSF2Q96CM8 615 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 FAF2Q96CS3 445 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 TRMT2BQ96GJ1 504 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 KLHL5Q96PQ7 755 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 KRT12Q99456 494 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 ZNF670Q9BS34 389 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 LRRC1Q9BTT6 524 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 FRMD8P1Q9BZ68 369 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 UBE2OQ9C0C9 1292 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 DDX47Q9H0S4 455 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 ANKZF1Q9H8Y5 726 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 CYP4F11Q9HBI6 524 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 PCDH18Q9HCL0 1135 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 TLR8Q9NR97 1041 aaKnown RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 PIGVQ9NUD9 493 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.6□□□□□ -0.87
LDHA-220ENST00000542179 KLHL11Q9NVR0 708 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 RCOR3Q9P2K3 495 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.6□□□□□ -0.873e-8■□□□□ 10.1
LDHA-220ENST00000542179 PCYOX1Q9UHG3 505 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 FBXW11Q9UKB1 542 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 RAB21Q9UL25 225 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 FZD10Q9ULW2 581 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 PCDHA11Q9Y5I1 949 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 V9GYY5 206 aaPredicted RBP9.6□□□□□ -0.87
LDHA-220ENST00000542179 GREB1Q4ZG55 1949 aa9.6□□□□□ -0.87
LDHA-220ENST00000542179 PLXNA4Q9HCM2 1894 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 FAM187AA6NFU0 413 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 SOAT2O75908 522 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ADH1AP07327 375 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 CD48P09326 243 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 RHOXF2BP0C7M4 288 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 CSH1P0DML2 217 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 CSH2P0DML3 217 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 KRT10P13645 584 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 HMGA1P17096 107 aaKnown RBP9.59□□□□□ -0.87
LDHA-220ENST00000542179 MCM3P25205 808 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ELF1P32519 619 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 PPP3CCP48454 512 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 HCAR3P49019 387 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 FNTAP49354 379 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 PGFP49763 221 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ATXN1P54253 815 aaKnown RBP9.59□□□□□ -0.87
LDHA-220ENST00000542179 CDH6P55285 790 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ERVFC1P60507 584 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ERVK-21P61565 698 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ADCY2Q08462 1091 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 IFRD2Q12894 506 aaPredicted RBP9.59□□□□□ -0.87
LDHA-220ENST00000542179 TAF10Q12962 218 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 NME3Q13232 169 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 PLD1Q13393 1074 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 NNTQ13423 1086 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 TFDP2Q14188 446 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 KRT81Q14533 505 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 PPP2R5DQ14738 602 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ARL13BQ3SXY8 428 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 ZC3H12AQ5D1E8 599 aaKnown RBP9.59□□□□□ -0.87
LDHA-220ENST00000542179 BRMS1LQ5PSV4 323 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 PDE12Q6L8Q7 609 aaKnown RBP9.59□□□□□ -0.87
LDHA-220ENST00000542179 TMC7Q7Z402 723 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 TAC4Q86UU9 113 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 FAM131BQ86XD5 332 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 KLHL7Q8IXQ5 586 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 CCDC185Q8N715 623 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 GPR152Q8TDT2 470 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 RNF139Q8WU17 664 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 AUTS2Q8WXX7 1259 aa9.59□□□□□ -0.87
LDHA-220ENST00000542179 FBXO32Q969P5 355 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms