RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 PMLP29590 882 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 CHKAP35790 457 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 RPL34P49207 117 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 BCAT1P54687 386 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 MARSP56192 900 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 ADIGQ0VDE8 80 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 BST2Q10589 180 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 NUDT18Q6ZVK8 323 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 LPCAT2Q7L5N7 544 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 CYP2U1Q7Z449 544 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC41A1Q8IVJ1 513 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 ARHGEF19Q8IW93 802 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 CHPFQ8IZ52 775 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 DEFB119Q8N690 84 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 EHBP1Q8NDI1 1231 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 NELFBQ8WX92 580 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 ERLEC1Q96DZ1 483 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 MRGPRX1Q96LB2 322 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 KREMEN1Q96MU8 473 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 DNAI2Q9GZS0 605 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 CNTN6Q9UQ52 1028 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 STON1Q9Y6Q2 735 aa12.36□□□□□ -0.43
CLSTN3-211ENST00000541667 CEP192Q8TEP8 1941 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 P4HA2O15460 535 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 C7P10643 843 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 CD19P15391 556 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 IL12RB1P42701 662 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 DAOAP59103 153 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 KLHL10Q6JEL2 608 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 TMEM270Q6UE05 265 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 ARMCX6Q7L4S7 300 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 RRAGAQ7L523 313 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 KIAA0907Q7Z7F0 614 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 SYT12Q8IV01 421 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 PGBD3Q8N328 593 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 EDEM1Q92611 657 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 PLD4Q96BZ4 506 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 ZNF419Q96HQ0 510 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 LRRC4Q9HBW1 653 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 CNGB3Q9NQW8 809 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 WASF3Q9UPY6 502 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 HBS1LQ9Y450 684 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 CHD8Q9HCK8 2581 aa12.35□□□□□ -0.43
CLSTN3-211ENST00000541667 KMT2BQ9UMN6 2715 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 BIN1O00499 593 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 MAP3K13O43283 966 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 IGLV3-27P01718 113 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 SETSIPP0DME0 302 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 LCP1P13796 627 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 PPP1R2P41236 205 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 RGS7P49802 495 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 STX17P56962 302 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC8A3P57103 927 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 YWHAEP62258 255 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 KCNH2Q12809 1159 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 FUT11Q495W5 492 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 SDE2Q6IQ49 451 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 MSANTD2Q6P1R3 559 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 METTL3Q86U44 580 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 CLEC4CQ8WTT0 213 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 SORCS1Q8WY21 1168 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 LMLNQ96KR4 655 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 SPACA7Q96KW9 195 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 NT5C1BQ96P26 610 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 SRRTQ9BXP5 876 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 SLC2A11Q9BYW1 496 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 MKRN2Q9H000 416 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 CAPN10Q9HC96 672 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 FSCN3Q9NQT6 498 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 ITM2CQ9NQX7 267 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 ABCC13Q9NSE7 274 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 ELOVL2Q9NXB9 296 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 HESX1Q9UBX0 185 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 HOOK1Q9UJC3 728 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 STRIP2Q9ULQ0 834 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 PCDHB4Q9Y5E5 795 aa12.34□□□□□ -0.43
CLSTN3-211ENST00000541667 GOLGA6L7A0A1B0GV03 622 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 KCNJ18B7U540 433 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 PIK3R2O00459 728 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 MSI1O43347 362 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 ZNF217O75362 1048 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 BRD2P25440 801 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 HLA-FP30511 346 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 GPD2P43304 727 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 SGSHP51688 502 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 COPAP53621 1224 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 SHC2P98077 582 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 GCNT1Q02742 428 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 ZNF33AQ06730 810 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 STIM1Q13586 685 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 ZNF234Q14588 700 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 TRIM61Q5EBN2 209 aa12.33□□□□□ -0.44
CLSTN3-211ENST00000541667 ADGRF1Q5T601 910 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms