RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 ARHGAP8P85298 464 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 RWDD4Q6NW29 188 aaKnown RBP15.53■□□□□ 0.08
VARS2-211ENST00000541562 MTHFD1LQ6UB35 978 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 PCGF5Q86SE9 256 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 RNF135Q8IUD6 432 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 TTC13Q8NBP0 860 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 OR52K1Q8NGK4 314 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 FNDC3AQ9Y2H6 1198 aaKnown RBP15.53■□□□□ 0.08
VARS2-211ENST00000541562 WDR81Q562E7 1941 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 CASTOR2A6NHX0 329 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 MOCS2O96007 188 aaPredicted RBP15.53■□□□□ 0.08
VARS2-211ENST00000541562 MYL3P08590 195 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 ARSAP15289 507 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 CYP2B6P20813 491 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 PGM1P36871 562 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 TUBP50607 506 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 RNF43Q68DV7 783 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 ZNF354CQ86Y25 554 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 E2F7Q96AV8 911 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 L3MBTL3Q96JM7 780 aaPredicted RBP15.53■□□□□ 0.08
VARS2-211ENST00000541562 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.53■□□□□ 0.08
VARS2-211ENST00000541562 TXNDC16Q9P2K2 825 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 TTC24A2A3L6 582 aaPredicted RBP15.52■□□□□ 0.08
VARS2-211ENST00000541562 PEX11AO75192 247 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 SMPD1P17405 629 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.08
VARS2-211ENST00000541562 TFDP2Q14188 446 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 ASRGL1Q7L266 308 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 MCRS1Q96EZ8 462 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 KLHL8Q9P2G9 620 aaPredicted RBP15.52■□□□□ 0.08
VARS2-211ENST00000541562 PDHXO00330 501 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 TREHO43280 583 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 TGFB3P10600 412 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 CYP2C9P11712 490 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 VAV1P15498 845 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 ZNF460Q14592 562 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 RALGPS1Q5JS13 557 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 C9orf131Q5VYM1 1079 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 CDCA2Q69YH5 1023 aaPredicted RBP15.52■□□□□ 0.08
VARS2-211ENST00000541562 RPS27LQ71UM5 84 aaKnown RBP15.52■□□□□ 0.08
VARS2-211ENST00000541562 BZW1Q7L1Q6 419 aaKnown RBP15.52■□□□□ 0.08
VARS2-211ENST00000541562 ERO1BQ86YB8 467 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 GBP7Q8N8V2 638 aaPredicted RBP15.52■□□□□ 0.08
VARS2-211ENST00000541562 PAAF1Q9BRP4 392 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 ZNF518BQ9C0D4 1074 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 DNAJC16Q9Y2G8 782 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 TEX264Q9Y6I9 313 aa15.52■□□□□ 0.08
VARS2-211ENST00000541562 PHIPQ8WWQ0 1821 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 SLC15A5A6NIM6 579 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 E9PBE3 544 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 TPP1O14773 563 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 KLHL41O60662 606 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 KRT37O76014 449 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 ZWINTO95229 277 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 GCKP35557 465 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 MRPS5P82675 430 aaKnown RBP15.52■□□□□ 0.07
VARS2-211ENST00000541562 SLC6A3Q01959 620 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 ACSBG2Q5FVE4 666 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 N4BP2L1Q5TBK1 243 aaPredicted RBP15.52■□□□□ 0.07
VARS2-211ENST00000541562 LRRC38Q5VT99 294 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 WSCD1Q658N2 575 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 PIGZQ86VD9 579 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 ACVR1CQ8NER5 493 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 RAB3IPQ96QF0 476 aaPredicted RBP15.52■□□□□ 0.07
VARS2-211ENST00000541562 TAS2R1Q9NYW7 299 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 KCNG1Q9UIX4 513 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 ANKRD12Q6UB98 2062 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 CDH23Q9H251 3354 aa15.52■□□□□ 0.07
VARS2-211ENST00000541562 TCN1P20061 433 aaPredicted RBP15.51■□□□□ 0.07
VARS2-211ENST00000541562 SURF1Q15526 300 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 TCHHL1Q5QJ38 904 aaPredicted RBP15.51■□□□□ 0.07
VARS2-211ENST00000541562 SLC26A11Q86WA9 606 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 ANKRD13AQ8IZ07 590 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 PYDC1Q8WXC3 89 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 STMN2Q93045 179 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 BCO2Q9BYV7 579 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 SLC24A2Q9UI40 661 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 CCL22O00626 93 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 CFLARO15519 480 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 PRPF4O43172 522 aaKnown RBP eCLIP15.51■□□□□ 0.071e-6■■□□□ 13.8
VARS2-211ENST00000541562 MAP3K13O43283 966 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 SNRPAP09012 282 aaKnown RBP15.51■□□□□ 0.07
VARS2-211ENST00000541562 USP17L7P0C7H9 530 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 EDNRBP24530 442 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 OLFML1Q6UWY5 402 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 GPC2Q8N158 579 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 SLC44A1Q8WWI5 657 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 ATP2A3Q93084 1043 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 EMID1Q96A84 441 aaPredicted RBP15.51■□□□□ 0.07
VARS2-211ENST00000541562 ZNF778Q96MU6 729 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 ZCWPW1Q9H0M4 648 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 SYBUQ9NX95 663 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 RPS6KL1Q9Y6S9 549 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 ABHD2P08910 425 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 C6orf222P0C671 652 aaPredicted RBP15.51■□□□□ 0.07
VARS2-211ENST00000541562 CCND1P24385 295 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 ABL2P42684 1182 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 ITGA9Q13797 1035 aa15.51■□□□□ 0.07
VARS2-211ENST00000541562 HIC1Q14526 733 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms