RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZNF274Q96GC6 653 aaPredicted RBP10□□□□□ -0.81
YBX3-211ENST00000541351 AIFM3Q96NN9 605 aa10□□□□□ -0.81
YBX3-211ENST00000541351 CIPCQ9C0C6 399 aa10□□□□□ -0.81
YBX3-211ENST00000541351 ELOVL4Q9GZR5 314 aa10□□□□□ -0.81
YBX3-211ENST00000541351 GZF1Q9H116 711 aaPredicted RBP10□□□□□ -0.81
YBX3-211ENST00000541351 DDX19AQ9NUU7 478 aaKnown RBP10□□□□□ -0.81
YBX3-211ENST00000541351 ELOVL2Q9NXB9 296 aa10□□□□□ -0.81
YBX3-211ENST00000541351 GDAP2Q9NXN4 497 aa10□□□□□ -0.81
YBX3-211ENST00000541351 KCND2Q9NZV8 630 aa10□□□□□ -0.81
YBX3-211ENST00000541351 ZNF510Q9Y2H8 683 aa10□□□□□ -0.81
YBX3-211ENST00000541351 NBPF19A0A087WUL8 3843 aa10□□□□□ -0.81
YBX3-211ENST00000541351 NBASA2RRP1 2371 aa10□□□□□ -0.81
YBX3-211ENST00000541351 A0A0B4J269 797 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 VPS37CA5D8V6 355 aaPredicted RBP9.99□□□□□ -0.81
YBX3-211ENST00000541351 NEMP2A6NFY4 417 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 FAM47DPA6NHR8 397 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 F8VP50 259 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 EFSO43281 561 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 RNASEH1O60930 286 aaKnown RBP9.99□□□□□ -0.81
YBX3-211ENST00000541351 TCEA3O75764 348 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 CYBBP04839 570 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 CENPBP07199 599 aaPredicted RBP9.99□□□□□ -0.81
YBX3-211ENST00000541351 THEGLP0DJG4 465 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 C7P10643 843 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 NXPH1P58417 271 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 IFRD2Q12894 506 aaPredicted RBP9.99□□□□□ -0.81
YBX3-211ENST00000541351 BNIP3Q12983 259 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 IGFBP7Q16270 282 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 C14orf80Q86SX3 495 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 IQCHQ86VS3 1027 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 DAW1Q8N136 415 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 MFSD2AQ8NA29 543 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 OR4C6Q8NH72 309 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 KCNN1Q92952 543 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 SERAC1Q96JX3 654 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 DUSP23Q9BVJ7 150 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 COMMD8Q9NX08 183 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 FBXO10Q9UK96 956 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 PCDHB11Q9Y5F2 797 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 SNX9Q9Y5X1 595 aa9.99□□□□□ -0.81
YBX3-211ENST00000541351 GABRDO14764 452 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 FAM189A1O60320 539 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 TNFSF15O95150 251 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 PIGRP01833 764 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 IGHV4-34P06331 123 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 POU3F2P20265 443 aaPredicted RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 POLR2BP30876 1174 aaKnown RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 MCM7P33993 719 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 CCR5P51681 352 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 MFAP3P55082 362 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 PDE4CQ08493 712 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 NR5A1Q13285 461 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 EIF3IQ13347 325 aaKnown RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 TBR1Q16650 682 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 SKIDA1Q1XH10 827 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 MANEAQ5SRI9 462 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 ZNF776Q68DI1 518 aaPredicted RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 RINT1Q6NUQ1 792 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 FOXR1Q6PIV2 292 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 RBM44Q6ZP01 1051 aaKnown RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 HS2ST1Q7LGA3 356 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 PTRH1Q86Y79 214 aaKnown RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 KCTD17Q8N5Z5 321 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 OR2T34Q8NGX1 318 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 MYCBPAPQ8TBZ2 947 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 SSC4DQ8WTU2 575 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 GTF3C6Q969F1 213 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 SRRTQ9BXP5 876 aaKnown RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 SLC2A11Q9BYW1 496 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 CUEDC1Q9NWM3 386 aaPredicted RBP9.98□□□□□ -0.81
YBX3-211ENST00000541351 ITGA11Q9UKX5 1188 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 AGAP1Q9UPQ3 857 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 PCDHGA7Q9Y5G6 932 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 SNX14Q9Y5W7 946 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 ATP8B3O60423 1300 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 CACNA1DQ01668 2161 aa9.98□□□□□ -0.81
YBX3-211ENST00000541351 SCN1AP35498 2009 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 SFI1A8K8P3 1242 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 TMX2-CTNND1H3BSU7 103 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 CPA1P15085 419 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 PRKCHP24723 683 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 ATP5C1P36542 298 aaKnown RBP9.97□□□□□ -0.81
YBX3-211ENST00000541351 TRIM29Q14134 588 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 FNDC3BQ53EP0 1204 aaKnown RBP9.97□□□□□ -0.81
YBX3-211ENST00000541351 EARS2Q5JPH6 523 aaKnown RBP9.97□□□□□ -0.81
YBX3-211ENST00000541351 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 ADALQ6DHV7 355 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 BORAQ6PGQ7 559 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 C1orf186Q6ZWK4 172 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 TADA2BQ86TJ2 420 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 SNX29Q8TEQ0 813 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 PCED1BQ96HM7 432 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 ORAI3Q9BRQ5 295 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 HAPLN2Q9GZV7 340 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 TLR8Q9NR97 1041 aaKnown RBP9.97□□□□□ -0.81
YBX3-211ENST00000541351 SUN2Q9UH99 717 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 POLQO75417 2590 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 ITPR2Q14571 2701 aa9.97□□□□□ -0.81
YBX3-211ENST00000541351 A0A087X0B3 334 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 CCDC187A0A096LP49 1063 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms