RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CLMNQ96JQ2 1002 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 EPAS1Q99814 870 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 SNRNP25Q9BV90 132 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 MRPL4Q9BYD3 311 aaKnown RBP10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 PPCSQ9HAB8 311 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 HES2Q9Y543 173 aa10.71□□□□□ -0.69
CDC42SE1-207ENST00000540998 CAPN8A6NHC0 703 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 GPR25O00155 361 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 MAGEC1O60732 1142 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 ARIH2O95376 493 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 RXRBP28702 533 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 STAT5BP51692 787 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 CUL3Q13618 768 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 DLG2Q15700 870 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 GRAMD1BQ3KR37 738 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 CCDC14Q49A88 953 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 MTHFD1LQ6UB35 978 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 NET1Q7Z628 596 aaPredicted RBP10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 FAM83AQ86UY5 434 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 MFN1Q8IWA4 741 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 OR6Y1Q8NGX8 325 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 SIGLEC10Q96LC7 697 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 C7orf26Q96N11 449 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 PHF12Q96QT6 1004 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 LGMNQ99538 433 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 MMADHCQ9H3L0 296 aaPredicted RBP10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 RSAD1Q9HA92 442 aa10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 RPL26L1Q9UNX3 145 aaKnown RBP10.71□□□□□ -0.7
CDC42SE1-207ENST00000540998 A0A1B0GTW7 788 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 LACTBL1A8MY62 500 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 GOLGA8TH3BQL2 631 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 NEMP1O14524 444 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 SIN3BO75182 1162 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 SNNO75324 88 aaPredicted RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 AMHP03971 560 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 ERVK-10P10266 1014 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 FGF3P11487 239 aaPredicted RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 ARSAP15289 507 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 GPD1P21695 349 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 RPS6KA3P51812 740 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 NDST1P52848 882 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 BACE1P56817 501 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 PDE1CQ14123 709 aaPredicted RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 HIC1Q14526 733 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPM1LQ5SGD2 360 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 PMF1Q6P1K2 205 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 GDPD5Q8WTR4 605 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 CNKSR2Q8WXI2 1034 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 MARK4Q96L34 752 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 PCDH18Q9HCL0 1135 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 S100A14Q9HCY8 104 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPME1Q9Y570 386 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZNF638Q14966 1978 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 C2CD4BA6NLJ0 364 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 A8MXQ7 604 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 H0YCG3 227 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 GABBR2O75899 941 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 RTN3O95197 1032 aaPredicted RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 TNNC2P02585 160 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 RAG1P15918 1043 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 MLH1P40692 756 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 SLC1A6P48664 564 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 TAP1Q03518 808 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 ITGA9Q13797 1035 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 TRMT5Q32P41 509 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 EFHC1Q5JVL4 640 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 GJC2Q5T442 439 aaPredicted RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 ATG16L1Q676U5 607 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZNF518BQ9C0D4 1074 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 DHX35Q9H5Z1 703 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 CAB39LQ9H9S4 337 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 TMEM216Q9P0N5 145 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 SEPT10Q9P0V9 454 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 TSPAN16Q9UKR8 245 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPEF2O14830 753 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 CHADO15335 359 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZBTB14O43829 449 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 FARP2O94887 1054 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZNF143P52747 638 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 RABGAP1LQ5R372 815 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ATF7IP2Q5U623 682 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 MBLAC2Q68D91 279 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 DHDDSQ86SQ9 333 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 EGFL6Q8IUX8 553 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ARHGAP24Q8N264 748 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PLD6Q8N2A8 252 aaKnown RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 MAPK15Q8TD08 544 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 TFB1MQ8WVM0 346 aaKnown RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ANKRD36BP1Q96IX9 119 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 TUBB6Q9BUF5 446 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 SPATA16Q9BXB7 569 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 CDT1Q9H211 546 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 SOX13Q9UN79 622 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 LAMA3Q16787 3333 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 APOL1O14791 398 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PRKCGP05129 697 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PGK2P07205 417 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PRKCHP24723 683 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 MGAT1P26572 445 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms