RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 GABPB2Q8TAK5 448 aaPredicted RBP5.4□□□□□ -1.54
PROM1-220ENST00000540805 PIP4K2CQ8TBX8 421 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 CPA5Q8WXQ8 436 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 KIF12Q96FN5 646 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 WWP1Q9H0M0 922 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 PCDH9Q9HC56 1237 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 KLHL11Q9NVR0 708 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 ZDHHC7Q9NXF8 308 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 KCNK4Q9NYG8 393 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 CIDEBQ9UHD4 219 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 SLC7A8Q9UHI5 535 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 PLA2G4CQ9UP65 541 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 ADM5C9JUS6 153 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 PI4K2BG5E9Z4 385 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 BUD23O43709 281 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 CALCAP01258 141 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 HMBSP08397 361 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 PDGFRBP09619 1106 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 DHRS4L1P0CG22 281 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 KRT10P13645 584 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 UQCRBP14927 111 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 NELFEP18615 380 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 RECQLP46063 649 aaPredicted RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 TUFMP49411 452 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 GPC3P51654 580 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 EMP3P54852 163 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 RPS6P62753 249 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 GSTM4Q03013 218 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 SFSWAPQ12872 951 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 ITGA7Q13683 1181 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 ITGA9Q13797 1035 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 TBCCQ15814 346 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 TMEM259Q4ZIN3 620 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 SLC44A4Q53GD3 710 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 C2CD6Q53TS8 623 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 RBM44Q6ZP01 1051 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 PCGF5Q86SE9 256 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 BBS5Q8N3I7 341 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 ZSWIM2Q8NEG5 633 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 CDC26Q8NHZ8 85 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 MZB1Q8WU39 189 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 DCAKDQ8WVC6 231 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 ATP6V1E2Q96A05 226 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 ABHD8Q96I13 439 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 PARK7Q99497 189 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 C11orf70Q9BRQ4 267 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 DHRS4Q9BTZ2 278 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 GCOM2Q9BZD3 368 aaPredicted RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 POLR3FQ9H1D9 316 aaPredicted RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 TMEM8AQ9HCN3 771 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 MRPL47Q9HD33 250 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 JPH1Q9HDC5 661 aaPredicted RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 GINM1Q9NU53 330 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 PTTG2Q9NZH5 202 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 SLC9A2Q9UBY0 812 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 STRIP2Q9ULQ0 834 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 FIS1Q9Y3D6 152 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 TELO2Q9Y4R8 837 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 ASB14A6NK59 587 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 TTLL13PA6NNM8 815 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 NFIBO00712 420 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 TXNDC9O14530 226 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 P4HBP07237 508 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 MAPTP10636 758 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 VCPP55072 806 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 XIAPP98170 497 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 HIC1Q14526 733 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 ZNF699Q32M78 642 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 RNF219Q5W0B1 726 aaPredicted RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 NXNQ6DKJ4 435 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 KYAT3Q6YP21 454 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 C3orf62Q6ZUJ4 267 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 MOB2Q70IA6 237 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 PRPF39Q86UA1 669 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 ZNF677Q86XU0 584 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 RCOR2Q8IZ40 523 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 DAW1Q8N136 415 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 FBXL13Q8NEE6 735 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 FAM172AQ8WUF8 416 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 C17orf50Q8WW18 174 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 KLHL4Q9C0H6 718 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 EPB41L1Q9H4G0 881 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 S100A14Q9HCY8 104 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 PAIP2BQ9ULR5 123 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 DRG1Q9Y295 367 aaKnown RBP5.4□□□□□ -1.55
PROM1-220ENST00000540805 SNX9Q9Y5X1 595 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 SCINQ9Y6U3 715 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 MYPNQ86TC9 1320 aa5.4□□□□□ -1.55
PROM1-220ENST00000540805 ARHGAP42A6NI28 874 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 CAPN14A8MX76 684 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 PRPSAP2O60256 369 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 CCDC166P0CW27 439 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 ARP10275 920 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 PIM1P11309 404 aaPredicted RBP5.39□□□□□ -1.55
PROM1-220ENST00000540805 CYP2C9P11712 490 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 ETV4P43268 484 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 JAK3P52333 1124 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 NAA20P61599 178 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 IRX4P78413 519 aa5.39□□□□□ -1.55
PROM1-220ENST00000540805 PTK7Q13308 1070 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms