RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 SLC12A8A0AV02 714 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 NDUFS2O75306 463 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 ZBED1O96006 694 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 PROS1P07225 676 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 SPINK2P20155 84 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 PRCPP42785 496 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 TKTL1P51854 596 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 SEMA3BQ13214 749 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 GOLGA7BQ2TAP0 167 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 FUT11Q495W5 492 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 CBWD6Q4V339 395 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 CBWD3Q5JTY5 395 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 CBWD5Q5RIA9 395 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 PIP4P1Q86T03 277 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 CPXM2Q8N436 756 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 UCMAQ8WVF2 138 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 ULBP1Q9BZM6 244 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 RMND1Q9NWS8 449 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 THAP10Q9P2Z0 257 aaPredicted RBP14.8□□□□□ -0.04
SNHG1-213ENST00000540725 COQ4Q9Y3A0 265 aa14.8□□□□□ -0.04
SNHG1-213ENST00000540725 ASPMQ8IZT6 3477 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 UPK3BL1B0FP48 263 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 C1QTNF9BB2RNN3 333 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 UPK3BL2E5RIL1 263 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 TULP2O00295 520 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 NPC1O15118 1278 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 SLC16A3O15427 465 aaKnown RBP14.79□□□□□ -0.04
SNHG1-213ENST00000540725 TOP3BO95985 862 aaKnown RBP14.79□□□□□ -0.04
SNHG1-213ENST00000540725 CYBBP04839 570 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 C1QTNF9P0C862 333 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 IL12RB1P42701 662 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 BCAT1P54687 386 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 PDE4CQ08493 712 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 CUL2Q13617 745 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 ENPP2Q13822 863 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 SGO2Q562F6 1265 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 PM20D1Q6GTS8 502 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 UNQ6494/PRO21346Q6UXR6 183 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 BHLHA9Q7RTU4 235 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 ANKS1BQ7Z6G8 1248 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 ZC3H3Q8IXZ2 948 aaKnown RBP14.79□□□□□ -0.04
SNHG1-213ENST00000540725 RGL4Q8IZJ4 473 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 HDDC3Q8N4P3 179 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 NDRG1Q92597 394 aaKnown RBP14.79□□□□□ -0.04
SNHG1-213ENST00000540725 PLD4Q96BZ4 506 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 ZNF419Q96HQ0 510 aaPredicted RBP14.79□□□□□ -0.04
SNHG1-213ENST00000540725 PIWIL1Q96J94 861 aaKnown RBP14.79□□□□□ -0.04
SNHG1-213ENST00000540725 TSG101Q99816 390 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 PRDM16Q9HAZ2 1276 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 TSPAN16Q9UKR8 245 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 CLEC4EQ9ULY5 219 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 ZFHX4Q86UP3 3567 aa14.79□□□□□ -0.04
SNHG1-213ENST00000540725 ARHGAP33O14559 1287 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 OPHN1O60890 802 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 CD19P15391 556 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 CD6P30203 668 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 ZNF132P52740 706 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 YWHAEP62258 255 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 FKBP3Q00688 224 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 BST2Q10589 180 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 EIF4HQ15056 248 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 COBLL1Q53SF7 1204 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 SYCP2LQ5T4T6 812 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 ZNF658Q5TYW1 1059 aaPredicted RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 METTL3Q86U44 580 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 FAM217AQ8IXS0 508 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 FMR1NBQ8N0W7 255 aaPredicted RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 MINDY1Q8N5J2 469 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 OR2I1PQ8NGU4 316 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 DDI1Q8WTU0 396 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 FOXJ1Q92949 421 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 GSDMAQ96QA5 445 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 SCNM1Q9BWG6 230 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 ADAM33Q9BZ11 813 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 MKRN2Q9H000 416 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 LRRC4Q9HBW1 653 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 OLA1Q9NTK5 396 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 ELOVL2Q9NXB9 296 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 USP36Q9P275 1121 aaKnown RBP14.78□□□□□ -0.04
SNHG1-213ENST00000540725 HESX1Q9UBX0 185 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 SUSD2Q9UGT4 822 aa14.78□□□□□ -0.04
SNHG1-213ENST00000540725 MUC22E2RYF6 1773 aaPredicted RBP14.77□□□□□ -0.04
SNHG1-213ENST00000540725 SPAARA0A1B0GVQ0 90 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 SYPP08247 313 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 PMS1P54277 932 aaKnown RBP14.77□□□□□ -0.04
SNHG1-213ENST00000540725 ADIGQ0VDE8 80 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 ZNF234Q14588 700 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 E2F5Q15329 346 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 TRIP4Q15650 581 aaPredicted RBP14.77□□□□□ -0.04
SNHG1-213ENST00000540725 PLEKHG6Q3KR16 790 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 WDR45BQ5MNZ6 344 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 ANKRD40Q6AI12 368 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 FMNL3Q8IVF7 1028 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 TOE1Q96GM8 510 aaKnown RBP14.77□□□□□ -0.04
SNHG1-213ENST00000540725 IPO9Q96P70 1041 aaKnown RBP14.77□□□□□ -0.04
SNHG1-213ENST00000540725 SLC2A11Q9BYW1 496 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 CIPCQ9C0C6 399 aa14.77□□□□□ -0.04
SNHG1-213ENST00000540725 WSB2Q9NYS7 404 aaPredicted RBP14.77□□□□□ -0.04
SNHG1-213ENST00000540725 ARMCX3Q9UH62 379 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms