RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 GABRB2P47870 512 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 ELF3P78545 371 aaPredicted RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 POU5F1BQ06416 359 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 TAF1BQ53T94 588 aaPredicted RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 KBTBD7Q8WVZ9 684 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 SLC4A5Q9BY07 1137 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 NMRK2Q9NPI5 230 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 SMYD2Q9NRG4 433 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 ARMCX1Q9P291 453 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 THP07101 528 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 KRT16P08779 473 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 BDNFP23560 247 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 MCCD1P59942 119 aaPredicted RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 NCALDP61601 193 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 TMEM110Q86TL2 294 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 LRRC52Q8N7C0 313 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 RFWD2Q8NHY2 731 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 RNF139Q8WU17 664 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 SRPK1Q96SB4 655 aaKnown RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 SYT15Q9BQS2 421 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 UNKQ9C0B0 810 aaKnown RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 USP29Q9HBJ7 922 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 NOD2Q9HC29 1040 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 ACSS2Q9NR19 701 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 FBXO6Q9NRD1 293 aaPredicted RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 DTLQ9NZJ0 730 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 G3BP2Q9UN86 482 aaKnown RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 EFR3BQ9Y2G0 817 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 USH1CQ9Y6N9 552 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 COL1A2P08123 1366 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 SMIM35A0A1B0GVV1 85 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 DFFAO00273 331 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 F2P00734 622 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 GNAT1P11488 350 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 ARFIP2P53365 341 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 SLC26A11Q86WA9 606 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 NUDCD3Q8IVD9 361 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 ARID3BQ8IVW6 561 aaPredicted RBP17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 PTPRN2Q92932 1015 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 PPP1R36Q96LQ0 422 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 HEY2Q9UBP5 337 aa17.65■□□□□ 0.42
EPB41L3-204ENST00000540638 SLC15A5A6NIM6 579 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 SNRPAP09012 282 aaKnown RBP17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 NQO1P15559 274 aaKnown RBP17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 NPR3P17342 541 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 CHI3L2Q15782 390 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 SLC45A4Q5BKX6 768 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 ANKRD20A2Q5SQ80 823 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 ANKRD20A1Q5TYW2 823 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 NT5DC4Q86YG4 428 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 GIMAP7Q8NHV1 300 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 KATNBL1Q9H079 304 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 YJEFN3A6XGL0 299 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 E7ENQ6 273 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 H3BRJ5 948 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 KRT38O76015 456 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 TGM2P21980 687 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 PDK4Q16654 411 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 CGB2Q6NT52 195 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 UNC5AQ6ZN44 842 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 KIRREL3Q8IZU9 778 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 STAMBPL1Q96FJ0 436 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 SHCBP1LQ9BZQ2 653 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 RXFP1Q9HBX9 757 aa17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 PPARGC1AQ9UBK2 798 aaKnown RBP17.64■□□□□ 0.41
EPB41L3-204ENST00000540638 NRP1O14786 923 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 CHUKO15111 745 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 ZWINTO95229 277 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 MGAT5Q09328 741 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 TNFAIP8L3Q5GJ75 292 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 RSPH3Q86UC2 560 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 UNC93AQ86WB7 457 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 LINC01465Q8N7H1 131 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 VRTNQ9H8Y1 702 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 PRG3Q9Y2Y8 225 aaPredicted RBP17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 RPS6KL1Q9Y6S9 549 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 ERVK-10P10266 1014 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 CD52P31358 61 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 SDHAF4Q5VUM1 108 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 FAM228AQ86W67 206 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 KHSRPQ92945 711 aaKnown RBP eCLIP17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 ZFATQ9P243 1243 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 GGA2Q9UJY4 613 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 LCTP09848 1927 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 TCEA3O75764 348 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 SETSIPP0DME0 302 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 CSH1P0DML2 217 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 CSH2P0DML3 217 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 MATKP42679 507 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 ACADSBP45954 432 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 CYP4V2Q6ZWL3 525 aaPredicted RBP17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 DCAKDQ8WVC6 231 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 MCUR1Q96AQ8 359 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 PLCD4Q9BRC7 762 aa17.63■□□□□ 0.41
EPB41L3-204ENST00000540638 PTPN7P35236 360 aa17.62■□□□□ 0.41
EPB41L3-204ENST00000540638 PNPLA4P41247 253 aa17.62■□□□□ 0.41
EPB41L3-204ENST00000540638 TTC39BQ5VTQ0 682 aaPredicted RBP17.62■□□□□ 0.41
EPB41L3-204ENST00000540638 ADGRD1Q6QNK2 874 aa17.62■□□□□ 0.41
EPB41L3-204ENST00000540638 SLC26A9Q7LBE3 791 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms