RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 USP8P40818 1118 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
LMO3-222ENST00000540445 GCNT1Q02742 428 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 ARID5AQ03989 594 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 EGFLAMQ63HQ2 1017 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 PMF1Q6P1K2 205 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 LPCAT2Q7L5N7 544 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 UBR7Q8N806 425 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 OLIG1Q8TAK6 271 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 SLC35F5Q8WV83 523 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 UCMAQ8WVF2 138 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 ACOX2Q99424 681 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 CRACR2AQ9BSW2 395 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 MIS12Q9H081 205 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 INTS2Q9H0H0 1204 aaKnown RBP9.42□□□□□ -0.9
LMO3-222ENST00000540445 ST7Q9NRC1 585 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 VPS45Q9NRW7 570 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 HCN2Q9UL51 889 aa9.42□□□□□ -0.9
LMO3-222ENST00000540445 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.42□□□□□ -0.9
LMO3-222ENST00000540445 TPRP12270 2363 aaKnown RBP9.42□□□□□ -0.9
LMO3-222ENST00000540445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 BCLAF3A2AJT9 711 aaKnown RBP9.41□□□□□ -0.9
LMO3-222ENST00000540445 WASH3PC4AMC7 463 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 MED7O43513 233 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 TSPAN3O60637 253 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 LETM1O95202 739 aaPredicted RBP9.41□□□□□ -0.9
LMO3-222ENST00000540445 ADRB1P08588 477 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 NCAM1P13591 858 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 BCKDHBP21953 392 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
LMO3-222ENST00000540445 MTIF2P46199 727 aaKnown RBP9.41□□□□□ -0.9
LMO3-222ENST00000540445 MFAP3P55082 362 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 DAOAP59103 153 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 TRIP4Q15650 581 aaPredicted RBP9.41□□□□□ -0.9
LMO3-222ENST00000540445 ARHGAP44Q17R89 818 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 PKDCCQ504Y2 493 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 MPPE1Q53F39 396 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 FYB2Q5VWT5 728 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 PMS2CLQ68D20 193 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 GBP6Q6ZN66 633 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 ARMCX6Q7L4S7 300 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 SCUBE3Q8IX30 993 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 TMEFF1Q8IYR6 380 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 CPXM2Q8N436 756 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 DEFB119Q8N690 84 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 FRMD1Q8N878 549 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 PIGKQ92643 395 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 TMA16Q96EY4 203 aaKnown RBP9.41□□□□□ -0.9
LMO3-222ENST00000540445 HSFY1Q96LI6 401 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 HBS1LQ9Y450 684 aaKnown RBP9.41□□□□□ -0.9
LMO3-222ENST00000540445 RAD54BQ9Y620 910 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 PCNX2A6NKB5 2137 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 PCDH15Q96QU1 1955 aa9.41□□□□□ -0.9
LMO3-222ENST00000540445 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.9
LMO3-222ENST00000540445 A0A1W2PQF6 199 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 CAPN9O14815 690 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 KHNYNO15037 678 aaKnown RBP9.4□□□□□ -0.9
LMO3-222ENST00000540445 MSI1O43347 362 aaKnown RBP9.4□□□□□ -0.9
LMO3-222ENST00000540445 THAP12O43422 761 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 SYNCRIPO60506 623 aaKnown RBP9.4□□□□□ -0.9
LMO3-222ENST00000540445 GABBR2O75899 941 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 FBXO21O94952 628 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 PENKP01210 267 aaPredicted RBP9.4□□□□□ -0.9
LMO3-222ENST00000540445 LTFP02788 710 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 GABRG2P18507 467 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 SLC9A1P19634 815 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 P2RY2P41231 377 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 E2F5Q15329 346 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 GEN1Q17RS7 908 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 PPM1JQ5JR12 505 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 ADGRF1Q5T601 910 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 STPG1Q5TH74 334 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 RNF43Q68DV7 783 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 TCEAL6Q6IPX3 200 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 ENOSF1Q7L5Y1 443 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 BHLHA9Q7RTU4 235 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 CYP2U1Q7Z449 544 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 UNC45BQ8IWX7 931 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 SCML4Q8N228 414 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 IPO4Q8TEX9 1081 aaKnown RBP9.4□□□□□ -0.9
LMO3-222ENST00000540445 CLEC4CQ8WTT0 213 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 ZNF606Q8WXB4 792 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 IRGQQ8WZA9 623 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 TCEAL3Q969E4 200 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 FAM149B1Q96BN6 582 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 P2RY11Q96G91 374 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 FAM81BQ96LP2 452 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 KREMEN1Q96MU8 473 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 ZSWIM1Q9BR11 485 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 SLC2A11Q9BYW1 496 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 CIPCQ9C0C6 399 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 CD248Q9HCU0 757 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 CACNA2D2Q9NY47 1150 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 FBXO10Q9UK96 956 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 STON1Q9Y6Q2 735 aa9.4□□□□□ -0.9
LMO3-222ENST00000540445 MUC22E2RYF6 1773 aaPredicted RBP9.4□□□□□ -0.91
LMO3-222ENST00000540445 CACNA1EQ15878 2313 aa9.39□□□□□ -0.91
LMO3-222ENST00000540445 ACACBO00763 2458 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms