RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTL9-203ENST00000540313 SLIT3O75094 1523 aa6.74□□□□□ -1.33
RTL9-203ENST00000540313 MED1Q15648 1581 aaPredicted RBP6.74□□□□□ -1.33
RTL9-203ENST00000540313 TTLL13PA6NNM8 815 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 BTNL10A8MVZ5 291 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 VWA5AO00534 786 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 AHCYL1O43865 530 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ALDH1A2O94788 518 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 SERPINE1P05121 402 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 PTPRAP18433 802 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 MLH1P40692 756 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 TUFMP49411 452 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 KCNJ2P63252 427 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 C1QBPQ07021 282 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 AUHQ13825 339 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 FAM110CQ1W6H9 321 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 AAK1Q2M2I8 961 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 MIIPQ5JXC2 388 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 TCHHL1Q5QJ38 904 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 CATSPERGQ6ZRH7 1159 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 TRIM48Q8IWZ4 208 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 STX19Q8N4C7 294 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ZCCHC9Q8N567 271 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 SLC35C1Q96A29 364 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 PABPC5Q96DU9 382 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 RIOX1Q9H6W3 641 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 SLC28A3Q9HAS3 691 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 DDX18Q9NVP1 670 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 THAP1Q9NVV9 213 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 BTBD7Q9P203 1132 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 CTNNAL1Q9UBT7 734 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 H3BRB1 525 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 HMGB3O15347 200 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 ANXA9O76027 345 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ITGB3P05106 788 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ELK3P41970 407 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 NPTX2P47972 431 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 CACNB2Q08289 660 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 KRR1Q13601 381 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 POLD3Q15054 466 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 PABPC1LQ4VXU2 614 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 PAN2Q504Q3 1202 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 RRM2BQ7LG56 351 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 RIN3Q8TB24 985 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ACTL9Q8TC94 416 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 GLMNQ92990 594 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 RMND5BQ96G75 393 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 P2RX7Q99572 595 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 NEUROG2Q9H2A3 272 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 TUT1Q9H6E5 874 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 MRPL17Q9NRX2 175 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.73□□□□□ -1.33
RTL9-203ENST00000540313 ARMCX1Q9P291 453 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 USP18Q9UMW8 372 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 GAKO14976 1311 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ZNF839A8K0R7 811 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 SUPT7LO94864 414 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 RTN3O95197 1032 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 FCGR1AP12314 374 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 PTPN7P35236 360 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 PSMC6P62333 389 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 PPIDQ08752 370 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 N4BP2L1Q5TBK1 243 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 STRA8Q7Z7C7 330 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 TRIM69Q86WT6 500 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ABRAQ8N0Z2 381 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 CASP10Q92851 521 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 TUBGCP3Q96CW5 907 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 OTUB1Q96FW1 271 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 MCCC1Q96RQ3 725 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 TCF7L2Q9NQB0 619 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 IARS2Q9NSE4 1012 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 BLOC1S4Q9NUP1 217 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 HEATR9A2RTY3 570 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 SERPINI2O75830 405 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 RHOBTB1O94844 696 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 NUDT17P0C025 328 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 HIST1H2AGP0C0S8 130 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 HIST1H2ADP20671 130 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ADRA1DP25100 572 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 RPA3P35244 121 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 GLRBP48167 497 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ZNF177Q13360 481 aaPredicted RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 CDH18Q13634 790 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 PHKG1Q16816 387 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 C10orf120Q5SQS8 335 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 ZFP1Q6P2D0 407 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 MPZL3Q6UWV2 235 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 OR6Y1Q8NGX8 325 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 DIS3LQ8TF46 1054 aaKnown RBP6.73□□□□□ -1.33
RTL9-203ENST00000540313 HIST1H2AHQ96KK5 128 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 HIST1H2AJQ99878 128 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 SH3GL2Q99962 352 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 H2AFJQ9BTM1 129 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 KCTD10Q9H3F6 313 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 KCNK4Q9NYG8 393 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 MCM8Q9UJA3 840 aa6.73□□□□□ -1.33
RTL9-203ENST00000540313 MRPS17Q9Y2R5 130 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms