RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 GOLM1Q8NBJ4 401 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 KAT5Q92993 513 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 ANO3Q9BYT9 981 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 WDR41Q9HAD4 459 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 HSFX1Q9UBD0 423 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 MKL2Q9ULH7 1088 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
PBX1-212ENST00000540236 POMPQ9Y244 141 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 TOP3BO95985 862 aaKnown RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 CDH1P12830 882 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 TP63Q9H3D4 680 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 SLC35C2Q9NQQ7 365 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 PI4KBQ9UBF8 816 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 NUDT5Q9UKK9 219 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 ARAP3Q8WWN8 1544 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 GUCY1B2O75343 617 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 FOSP01100 380 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 FUCA1P04066 466 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 SULT2A1Q06520 285 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 ALDH16A1Q8IZ83 802 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 SOX17Q9H6I2 414 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 MLH3Q9UHC1 1453 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 B3GALNT1O75752 331 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 MYCLP12524 364 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 ACTR3P61158 418 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 CRADDP78560 199 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 EPS8Q12929 822 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 ECM1Q16610 540 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 BRDTQ58F21 947 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 CBWD3Q5JTY5 395 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 CBWD5Q5RIA9 395 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 SNRNP48Q6IEG0 339 aaKnown RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 PPIL6Q8IXY8 311 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 LRRC20Q8TCA0 184 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 FAM84AQ96KN4 292 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 C8orf37Q96NL8 207 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 FRMD8Q9BZ67 464 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 SMARCAD1Q9H4L7 1026 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 A2ML1A8K2U0 1454 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 MST1RQ04912 1400 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 MAGEC1O60732 1142 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 CDK9P50750 372 aaKnown RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 CCNIQ14094 377 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 INPP5AQ14642 412 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 MFSD5Q6N075 450 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 C12orf50Q8NA57 414 aaPredicted RBP11.39□□□□□ -0.59
PBX1-212ENST00000540236 EGFL7Q9UHF1 273 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 TMEM59LQ9UK28 342 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 CDC14AQ9UNH5 594 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 PCDHGA8Q9Y5G5 932 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 A0A0A6YYK5 440 aaPredicted RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 SLC16A4O15374 487 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 ATP6V1B2P21281 511 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 IL12AP29459 219 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 PSMC6P62333 389 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 DCDC5Q6ZRR9 648 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 TRIM63Q969Q1 353 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 RMDN1Q96DB5 314 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 TASP1Q9H6P5 420 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 SRP68Q9UHB9 627 aaKnown RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 CEPT1Q9Y6K0 416 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 ZNF536O15090 1300 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 TISP43B9A030 160 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 PDE8AO60658 829 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 CPA3P15088 417 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 SLC5A2P31639 672 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 NLRP11P59045 1033 aaKnown RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 DLG4P78352 724 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 STK11Q15831 433 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 LSM14AQ8ND56 463 aaKnown RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 ACAT2Q9BWD1 397 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 TOPORSQ9NS56 1045 aaPredicted RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 MROH2AA6NES4 1674 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 CENPXA8MT69 81 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 H3BUI4 141 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 RBAK-RBAKDNI3L0D1 243 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 DFFAO00273 331 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 TP73O15350 636 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 EPN2O95208 641 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 GLRA2P23416 452 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 SLC1A1P43005 524 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 NPEPPSP55786 919 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 ABATP80404 500 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 TCP10Q12799 353 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 EPHA7Q15375 998 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 DLG2Q15700 870 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 ADGRA1Q86SQ6 560 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 EPB41L1Q9H4G0 881 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 KIF17Q9P2E2 1029 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 ATP9BO43861 1147 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 DNAJA2O60884 412 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 AMHP03971 560 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms