RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 CCHCR1Q8TD31 782 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 LRRC45Q96CN5 670 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 FAF2Q96CS3 445 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 PGAP3Q96FM1 320 aaPredicted RBP10.05□□□□□ -0.8
MDH1-215ENST00000539945 CCDC114Q96M63 670 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 CDK15Q96Q40 435 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 FAM118BQ9BPY3 351 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 ZNF670Q9BS34 389 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 TRIM62Q9BVG3 475 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 MAK16Q9BXY0 300 aaKnown RBP10.05□□□□□ -0.8
MDH1-215ENST00000539945 CALCOCO1Q9P1Z2 691 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 NAALADL1Q9UQQ1 740 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 ZNF148Q9UQR1 794 aa10.05□□□□□ -0.8
MDH1-215ENST00000539945 COL4A4P53420 1690 aaPredicted RBP10.05□□□□□ -0.8
MDH1-215ENST00000539945 VWA8A3KMH1 1905 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 M0QYT0 321 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 CAPN9O14815 690 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 EFCAB14O75071 495 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 OR4Q2P0C623 313 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 KLRC2P26717 231 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 RDXP35241 583 aaKnown RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 GRIK1P39086 918 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 ALDH7A1P49419 539 aaKnown RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 CTCFP49711 727 aaPredicted RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 ATXN1P54253 815 aaKnown RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 AIF1P55008 147 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 DYNLT1P63172 113 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 CAV1Q03135 178 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 DEUP1Q05D60 604 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 GPS2Q13227 327 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 CA9Q16790 459 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 KCTD19Q17RG1 926 aaPredicted RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 ANKRD20A8PQ5CZ79 823 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 SLC9A4Q6AI14 798 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 ZNF365Q70YC5 407 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 NECAB2Q7Z6G3 386 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 CEP57Q86XR8 500 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 ALLCQ8N6M5 410 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 CCDC185Q8N715 623 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 TSEN2Q8NCE0 465 aaKnown RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 ART4Q93070 314 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 TOP1MTQ969P6 601 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 SNF8Q96H20 258 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 C8orf48Q96LL4 319 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 FMO2Q99518 471 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 PRDM16Q9HAZ2 1276 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 GPATCH2LQ9NWQ4 482 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 MTMR10Q9NXD2 777 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 RCOR3Q9P2K3 495 aaPredicted RBP10.04□□□□□ -0.8
MDH1-215ENST00000539945 ASIC3Q9UHC3 531 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 FZD10Q9ULW2 581 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 AP4E1Q9UPM8 1137 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 PCDHB5Q9Y5E4 795 aa10.04□□□□□ -0.8
MDH1-215ENST00000539945 LTBP2Q14767 1821 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 TRIM66O15016 1216 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 TP73O15350 636 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 PPFIA2O75334 1257 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 F9P00740 461 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 KRT14P02533 472 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 AMHP03971 560 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 NCAM1P13591 858 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 ATF2P15336 505 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 ZFXP17010 805 aaPredicted RBP10.03□□□□□ -0.8
MDH1-215ENST00000539945 TGM2P21980 687 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 ITGB8P26012 769 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 SLC5A3P53794 718 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 PLTPP55058 493 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 PITX1P78337 314 aaPredicted RBP10.03□□□□□ -0.8
MDH1-215ENST00000539945 CALCOCO2Q13137 446 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 GPR17Q13304 367 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 BSPRYQ5W0U4 402 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 MFSD5Q6N075 450 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 ANKS3Q6ZW76 656 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 GSTA5Q7RTV2 222 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 TMC3Q7Z5M5 1100 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 TMEM173Q86WV6 379 aaPredicted RBP10.03□□□□□ -0.8
MDH1-215ENST00000539945 FAM131BQ86XD5 332 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 IQCKQ8N0W5 287 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 PQLC3Q8N755 202 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 PLD5Q8N7P1 536 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 BBOF1Q8ND07 529 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 PCDH19Q8TAB3 1148 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 SCAMP5Q8TAC9 235 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 PRR7Q8TB68 274 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 SLC7A14Q8TBB6 771 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 FBXO25Q8TCJ0 367 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.03□□□□□ -0.8
MDH1-215ENST00000539945 BCL7CQ8WUZ0 217 aaPredicted RBP10.03□□□□□ -0.8
MDH1-215ENST00000539945 NTAN1Q96AB6 310 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 HAUS1Q96CS2 278 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 ZNF689Q96CS4 500 aaPredicted RBP10.03□□□□□ -0.8
MDH1-215ENST00000539945 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
MDH1-215ENST00000539945 KCTD15Q96SI1 283 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms