RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 C5orf42Q9H799 3197 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 SMIM31A0A1B0GVY4 71 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 MYADML2A6NDP7 307 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 K7ENM7 598 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 PFDN6O15212 129 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 NPPAP01160 153 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 MDH1P40925 334 aaKnown RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 PCYT1AP49585 367 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 LIMK1P53667 647 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 RPP38P78345 283 aaKnown RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 TAGLNQ01995 201 aaKnown RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 MAPK7Q13164 816 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 FAM180BQ6P0A1 224 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 ABRAXAS1Q6UWZ7 409 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 ARHGAP36Q6ZRI8 547 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 HS2ST1Q7LGA3 356 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 FRMD5Q7Z6J6 570 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 CCNJLQ8IV13 435 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 DAW1Q8N136 415 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 DENND2DQ9H6A0 471 aaPredicted RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 RUBCNLQ9H714 662 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 ATP13A3Q9H7F0 1226 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 ADAM22Q9P0K1 906 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 SLC8A2Q9UPR5 921 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 NFASCO94856 1347 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 MROH7Q68CQ1 1323 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 TRIOO75962 3097 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 CTAGE15A4D2H0 777 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 RBAK-RBAKDNI3L0D1 243 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 KRIT1O00522 736 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 E2F3O00716 465 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 BACH1O14867 736 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 SNPHO15079 494 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 SORBS3O60504 671 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 DKC1O60832 514 aaKnown RBP eCLIP13.01□□□□□ -0.335e-33■■■■■ 32.3
DDX55-206ENST00000539934 KRT75O95678 551 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 PSAPP07602 524 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 CTAGE8P0CG41 777 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 PLA2G5P39877 138 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 ALDH5A1P51649 535 aaPredicted RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 DSC3Q14574 896 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 FUT11Q495W5 492 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 PLA2G4FQ68DD2 849 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 RNF180Q86T96 592 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 CTAGE6Q86UF2 777 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 KSR1Q8IVT5 923 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 NKAIN4Q8IVV8 208 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 CTAGE4Q8IX94 777 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 VPS11Q9H270 941 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 LZTFL1Q9NQ48 299 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 ANKEF1Q9NU02 776 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 HECAQ9UBI9 543 aaPredicted RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 RABGEF1Q9UJ41 708 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 SPEF1Q9Y4P9 236 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 MAGED1Q9Y5V3 778 aaPredicted RBP13.01□□□□□ -0.33
DDX55-206ENST00000539934 ZMYM2Q9UBW7 1377 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 ARID2Q68CP9 1835 aa13.01□□□□□ -0.33
DDX55-206ENST00000539934 SPATA31C2B4DYI2 1134 aa13□□□□□ -0.33
DDX55-206ENST00000539934 KIAA0355O15063 1070 aa13□□□□□ -0.33
DDX55-206ENST00000539934 TGFB1I1O43294 461 aa13□□□□□ -0.33
DDX55-206ENST00000539934 CYP1A1P04798 512 aaPredicted RBP13□□□□□ -0.33
DDX55-206ENST00000539934 MYL3P08590 195 aa13□□□□□ -0.33
DDX55-206ENST00000539934 CCR3P51677 355 aa13□□□□□ -0.33
DDX55-206ENST00000539934 APBA1Q02410 837 aa13□□□□□ -0.33
DDX55-206ENST00000539934 ACY1Q03154 408 aa13□□□□□ -0.33
DDX55-206ENST00000539934 KCNH2Q12809 1159 aa13□□□□□ -0.33
DDX55-206ENST00000539934 CFAP161Q6P656 301 aa13□□□□□ -0.33
DDX55-206ENST00000539934 BORAQ6PGQ7 559 aa13□□□□□ -0.33
DDX55-206ENST00000539934 WDR59Q6PJI9 974 aa13□□□□□ -0.33
DDX55-206ENST00000539934 MMAAQ8IVH4 418 aaKnown RBP13□□□□□ -0.33
DDX55-206ENST00000539934 OR8H2Q8N162 312 aa13□□□□□ -0.33
DDX55-206ENST00000539934 RNF169Q8NCN4 708 aa13□□□□□ -0.33
DDX55-206ENST00000539934 TTC17Q96AE7 1141 aa13□□□□□ -0.33
DDX55-206ENST00000539934 HDAC11Q96DB2 347 aa13□□□□□ -0.33
DDX55-206ENST00000539934 CCDC138Q96M89 665 aa13□□□□□ -0.33
DDX55-206ENST00000539934 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13□□□□□ -0.33
DDX55-206ENST00000539934 CUEDC1Q9NWM3 386 aaPredicted RBP13□□□□□ -0.33
DDX55-206ENST00000539934 KIF17Q9P2E2 1029 aa13□□□□□ -0.33
DDX55-206ENST00000539934 MRPS23Q9Y3D9 190 aaKnown RBP13□□□□□ -0.33
DDX55-206ENST00000539934 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
DDX55-206ENST00000539934 CCT8L1PA6NM43 557 aa13□□□□□ -0.33
DDX55-206ENST00000539934 PRRT4C9JH25 899 aa13□□□□□ -0.33
DDX55-206ENST00000539934 EPHB6O15197 1021 aa13□□□□□ -0.33
DDX55-206ENST00000539934 SLC16A3O15427 465 aaKnown RBP13□□□□□ -0.33
DDX55-206ENST00000539934 GPC4O75487 556 aa13□□□□□ -0.33
DDX55-206ENST00000539934 ZMYND10O75800 440 aa13□□□□□ -0.33
DDX55-206ENST00000539934 AKAP3O75969 853 aa13□□□□□ -0.33
DDX55-206ENST00000539934 NDUFA10O95299 355 aa13□□□□□ -0.33
DDX55-206ENST00000539934 PRLP01236 227 aa13□□□□□ -0.33
DDX55-206ENST00000539934 SNRPAP09012 282 aaKnown RBP13□□□□□ -0.33
DDX55-206ENST00000539934 ADSLP30566 484 aaPredicted RBP13□□□□□ -0.33
DDX55-206ENST00000539934 PTGS2P35354 604 aa13□□□□□ -0.33
DDX55-206ENST00000539934 NPEPPSP55786 919 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms