RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 CNOT10Q9H9A5 744 aaKnown RBP17.77■□□□□ 0.44
LTBR-207ENST00000539925 ARHGEF4Q9NR80 690 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 NINJ2Q9NZG7 142 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 TTC3P53804 2025 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 EEF2KO00418 725 aaKnown RBP17.77■□□□□ 0.43
LTBR-207ENST00000539925 PPP1R12AO14974 1030 aaPredicted RBP17.77■□□□□ 0.43
LTBR-207ENST00000539925 KCNN4O15554 427 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 GCATO75600 419 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 LMAN1P49257 510 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 GDF10P55107 478 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 YWHAGP61981 247 aaKnown RBP eCLIP17.77■□□□□ 0.43
LTBR-207ENST00000539925 TLE2Q04725 743 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 FAAP100Q0VG06 881 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 PAFAH1B3Q15102 231 aaKnown RBP17.77■□□□□ 0.43
LTBR-207ENST00000539925 BTBD8Q5XKL5 378 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 NCBP2-AS2Q69YL0 99 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 FUT10Q6P4F1 479 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 MON1AQ86VX9 555 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 CPT1BQ92523 772 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 SCML2Q9UQR0 700 aa17.77■□□□□ 0.43
LTBR-207ENST00000539925 COL4A4P53420 1690 aaPredicted RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 A0A087WUV0 522 aaPredicted RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 C5orf60A6NFR6 353 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 TBKBP1A7MCY6 615 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 MTSS1O43312 755 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 EFCAB14O75071 495 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 RTN3O95197 1032 aaPredicted RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 ETS1P14921 441 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 ATP2A2P16615 1042 aaKnown RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 GOT1P17174 413 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 MAGEA6P43360 314 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 SLC11A1P49279 550 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 HEATR6Q6AI08 1181 aaKnown RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 RFX8Q6ZV50 586 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 NUP93Q8N1F7 819 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 TFB1MQ8WVM0 346 aaKnown RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 TLCD1Q96CP7 247 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 CAPS2Q9BXY5 557 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 RHOBTB2Q9BYZ6 727 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 OSBPL2Q9H1P3 480 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 SAYSD1Q9NPB0 183 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 ABI2Q9NYB9 513 aaPredicted RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.76■□□□□ 0.43
LTBR-207ENST00000539925 CALCOCO1Q9P1Z2 691 aa17.76■□□□□ 0.43
LTBR-207ENST00000539925 TANC1Q9C0D5 1861 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 SRRM3A6NNA2 597 aaPredicted RBP17.75■□□□□ 0.43
LTBR-207ENST00000539925 E7ESA3 106 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 F8W810 466 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 SHOX2O60902 331 aaPredicted RBP17.75■□□□□ 0.43
LTBR-207ENST00000539925 ACSL3O95573 720 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 IGLV3-25P01717 112 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 GALTP07902 379 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 MX2P20592 715 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 AMPD1P23109 780 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 PHBP35232 272 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 SERPINB6P35237 376 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 PSEN1P49768 467 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 ATN1P54259 1190 aaPredicted RBP17.75■□□□□ 0.43
LTBR-207ENST00000539925 GYS2P54840 703 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 TPI1P60174 286 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 BASP1P80723 227 aaKnown RBP17.75■□□□□ 0.43
LTBR-207ENST00000539925 SEMA3BQ13214 749 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 GPR17Q13304 367 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 MTA1Q13330 715 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 DPYSQ14117 519 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
LTBR-207ENST00000539925 KYNUQ16719 465 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 ACBD5Q5T8D3 534 aaPredicted RBP17.75■□□□□ 0.43
LTBR-207ENST00000539925 KCTD16Q68DU8 428 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 DQX1Q8TE96 717 aaKnown RBP17.75■□□□□ 0.43
LTBR-207ENST00000539925 OLFM3Q96PB7 478 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 SMOC2Q9H3U7 446 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 DTLQ9NZJ0 730 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 BCCIPQ9P287 314 aaKnown RBP eCLIP17.75■□□□□ 0.43
LTBR-207ENST00000539925 TBX21Q9UL17 535 aa17.75■□□□□ 0.43
LTBR-207ENST00000539925 SYNJ2BP-COX16A0A087WUM0 186 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SPAG6O75602 509 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 DGKIO75912 1065 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SHBGP04278 402 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SLC2A3P11169 496 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 RBL1P28749 1068 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 PITX1P78337 314 aaPredicted RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 CDK16Q00536 496 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 TRIM60Q495X7 471 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 KCNT2Q6UVM3 1135 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 PRUNE1Q86TP1 453 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SCN4BQ8IWT1 228 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 ATP11CQ8NB49 1132 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 MCUQ8NE86 351 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 RNF34Q969K3 372 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SPATA17Q96L03 361 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SERPINB11Q96P15 392 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 HAPLN3Q96S86 360 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 TTPALQ9BTX7 342 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 MARCH5Q9NX47 278 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 IL37Q9NZH6 218 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms