RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ROPN1Q9HAT0 212 aaPredicted RBP17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 CNGB3Q9NQW8 809 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 EFR3BQ9Y2G0 817 aa17.73■□□□□ 0.43
PCDHB17P-201ENST00000539533 CFAP73A6NFT4 308 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 HOXA2O43364 376 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 SNX3O60493 162 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 DAB1O75553 588 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 SULT1E1P49888 294 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 LBX1P52954 281 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 MAPRE1Q15691 268 aaKnown RBP17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 SLC25A52Q3SY17 297 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 PRUNE1Q86TP1 453 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 EXOC3L1Q86VI1 746 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 TMEM173Q86WV6 379 aaPredicted RBP17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 RFX6Q8HWS3 928 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 POPDC2Q9HBU9 364 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 DMAP1Q9NPF5 467 aaPredicted RBP17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 NLRC5Q86WI3 1866 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 SYNJ2BP-COX16A0A087WUM0 186 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 FBXO21O94952 628 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 ZBED1O96006 694 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 GALTP07902 379 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 CLTBP09497 229 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 IL4RP24394 825 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 ITGB8P26012 769 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 NOS2P35228 1153 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 OTUD1Q5VV17 481 aaPredicted RBP17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 BBS12Q6ZW61 710 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 TRMT10CQ7L0Y3 403 aaKnown RBP17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 TBC1D1Q86TI0 1168 aaPredicted RBP17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 SPATA2LQ8IUW3 424 aaPredicted RBP17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 CCDC185Q8N715 623 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 GRK7Q8WTQ7 553 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 SLC2A13Q96QE2 648 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 ZCWPW1Q9H0M4 648 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 COX16Q9P0S2 106 aa17.72■□□□□ 0.43
PCDHB17P-201ENST00000539533 VWA8A3KMH1 1905 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 OAS1P00973 400 aaKnown RBP17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 IKBKEQ14164 716 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 KRT81Q14533 505 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 BHLHA9Q7RTU4 235 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 FAM131BQ86XD5 332 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 SCAMP5Q8TAC9 235 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 ACTL9Q8TC94 416 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 TEKT4Q8WW24 435 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 NT5C3BQ969T7 300 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 COLEC11Q9BWP8 271 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 C11orf49Q9H6J7 331 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 ZNF148Q9UQR1 794 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 NEU2Q9Y3R4 380 aa17.71■□□□□ 0.43
PCDHB17P-201ENST00000539533 MICAL3Q7RTP6 2002 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 SYN3O14994 580 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 GAS8O95995 478 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 OTUD4Q01804 1114 aaKnown RBP17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 CALCOCO2Q13137 446 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 RIPK1Q13546 671 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 LONRF1Q17RB8 773 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 ACCSLQ4AC99 568 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 FNDC1Q4ZHG4 1894 aaPredicted RBP17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 PPP6R3Q5H9R7 873 aaPredicted RBP17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 C4orf50Q6ZRC1 276 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 STRADAQ7RTN6 431 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 DYDC1Q8WWB3 177 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 NPY6RQ99463 290 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 MRPL9Q9BYD2 267 aaKnown RBP17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 CDC42EP4Q9H3Q1 356 aaKnown RBP17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 C10orf88Q9H8K7 445 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 PCDH18Q9HCL0 1135 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 ASIC3Q9UHC3 531 aa17.71■□□□□ 0.42
PCDHB17P-201ENST00000539533 PTPRDP23468 1912 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 M0QYT0 321 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 MDM4O15151 490 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 UBOX5O94941 541 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 GRIK1P39086 918 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 VPS41P49754 854 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 LRRC14Q15048 493 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 DRICH1Q6PGQ1 229 aaPredicted RBP17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 FAM43BQ6ZT52 329 aaPredicted RBP17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 GSTA5Q7RTV2 222 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 GLIS1Q8NBF1 620 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 ADAM32Q8TC27 787 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 MGARPQ8TDB4 240 aa17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 MAK16Q9BXY0 300 aaKnown RBP17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 ABI2Q9NYB9 513 aaPredicted RBP17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 LAMA2P24043 3122 aaKnown RBP17.7■□□□□ 0.42
PCDHB17P-201ENST00000539533 CAPN9O14815 690 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 PECAM1P16284 738 aaPredicted RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 IVDP26440 423 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 NME3Q13232 169 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 PTK6Q13882 451 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 PDK2Q15119 407 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 OASLQ15646 514 aaKnown RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 CTXN3Q4LDR2 81 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 FUT10Q6P4F1 479 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 CNKSR3Q6P9H4 555 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 TAS1R1Q7RTX1 841 aa17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 TMCO2Q7Z6W1 182 aaPredicted RBP17.69■□□□□ 0.42
PCDHB17P-201ENST00000539533 MAP7D3Q8IWC1 876 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms