RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 LIN7CQ9NUP9 197 aaKnown RBP7.54□□□□□ -1.2
TRAV11-201ENST00000539512 ING1Q9UK53 422 aaPredicted RBP7.54□□□□□ -1.2
TRAV11-201ENST00000539512 BAG5Q9UL15 447 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 CNTN6Q9UQ52 1028 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.53□□□□□ -1.2
TRAV11-201ENST00000539512 UBE2Q2LH0YL09 131 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 MGST3O14880 152 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 VEGFAP15692 232 aaPredicted RBP7.53□□□□□ -1.2
TRAV11-201ENST00000539512 TAF12Q16514 161 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 STRIP1Q5VSL9 837 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 VSTM1Q6UX27 236 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 RRAGAQ7L523 313 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 ARHGEF25Q86VW2 580 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 C16orf71Q8IYS4 520 aaPredicted RBP7.53□□□□□ -1.2
TRAV11-201ENST00000539512 SLC16A11Q8NCK7 471 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 SIMC1Q8NDZ2 872 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 OR52L2PQ8NGH6 319 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 OR6Y1Q8NGX8 325 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 MAFAQ8NHW3 353 aaPredicted RBP7.53□□□□□ -1.2
TRAV11-201ENST00000539512 SCAMP5Q8TAC9 235 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 GCC1Q96CN9 775 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 SNX18Q96RF0 628 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 TIMP4Q99727 224 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 THAP7Q9BT49 309 aaPredicted RBP7.53□□□□□ -1.2
TRAV11-201ENST00000539512 SCAND2PQ9GZW5 306 aaPredicted RBP7.53□□□□□ -1.2
TRAV11-201ENST00000539512 VPS45Q9NRW7 570 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 RXFP3Q9NSD7 469 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 ZNHIT2Q9UHR6 403 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 PCDHB7Q9Y5E2 793 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 DMRT1Q9Y5R6 373 aa7.53□□□□□ -1.2
TRAV11-201ENST00000539512 TBC1D3DA0A087WVF3 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3IA0A087WXS9 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3EA0A087X179 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3KA0A087X1G2 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3BA6NDS4 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3FA6NER0 549 aaPredicted RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3LB9A6J9 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 DHHO43323 396 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3HP0C7X1 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 CST5P28325 142 aaPredicted RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 SERPINA4P29622 427 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 GALNSP34059 522 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 PAPOLAP51003 745 aaKnown RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 CFHR3Q02985 330 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 KCNB1Q14721 858 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBRG1Q3YBR2 411 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 CERKLQ49MI3 558 aaPredicted RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 RNASE12Q5GAN4 147 aaKnown RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 CC2D1BQ5T0F9 858 aaKnown RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3GQ6DHY5 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3CQ6IPX1 549 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 DCDC5Q6ZRR9 648 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 TBC1D3Q8IZP1 549 aaPredicted RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 OR1N1Q8NGS0 311 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 AFG1LQ8WV93 481 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 PAAF1Q9BRP4 392 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 PCED1AQ9H1Q7 454 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 KLK15Q9H2R5 256 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 ALG13Q9NP73 1137 aaKnown RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 SRP68Q9UHB9 627 aaKnown RBP7.52□□□□□ -1.21
TRAV11-201ENST00000539512 DAPP1Q9UN19 280 aa7.52□□□□□ -1.21
TRAV11-201ENST00000539512 CCDC187A0A096LP49 1063 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 MT-CO3P00414 261 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 C1RP00736 705 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 WT1P19544 449 aaPredicted RBP7.51□□□□□ -1.21
TRAV11-201ENST00000539512 GRK5P34947 590 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 GPC5P78333 572 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 RAE1P78406 368 aaKnown RBP7.51□□□□□ -1.21
TRAV11-201ENST00000539512 MFSD13AQ14CX5 517 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 CNGA3Q16281 694 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 TRIM60Q495X7 471 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 WDR93Q6P2C0 686 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 ACSM6Q6P461 480 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 BCDIN3DQ7Z5W3 292 aaKnown RBP7.51□□□□□ -1.21
TRAV11-201ENST00000539512 C2CD5Q86YS7 1000 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 THAP4Q8WY91 577 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 SARAFQ96BY9 339 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 BBC3Q96PG8 261 aaPredicted RBP7.51□□□□□ -1.21
TRAV11-201ENST00000539512 MACROD1Q9BQ69 325 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 VPS16Q9H269 839 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 ITM2CQ9NQX7 267 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 MAFFQ9ULX9 164 aa7.51□□□□□ -1.21
TRAV11-201ENST00000539512 GXYLT2A0PJZ3 443 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 TARM1B6A8C7 271 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 H0Y3Z8 333 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 H7C1Q1 480 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 SMIM22K7EJ46 135 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 PRAMEF2O60811 474 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 KRT38O76015 456 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 PROZP22891 400 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 SLC8A1P32418 973 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 ADD2P35612 726 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 FAM187BQ17R55 369 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 AAK1Q2M2I8 961 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 FTSJ3Q8IY81 847 aaKnown RBP7.5□□□□□ -1.21
TRAV11-201ENST00000539512 GPR150Q8NGU9 434 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 EDC3Q96F86 508 aaKnown RBP7.5□□□□□ -1.21
TRAV11-201ENST00000539512 DDX23Q9BUQ8 820 aaKnown RBP7.5□□□□□ -1.21
TRAV11-201ENST00000539512 RNF26Q9BY78 433 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms