RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ERMARDQ5T6L9 678 aa14.94□□□□□ -0.02
CACNB1-206ENST00000539338 PLD3Q8IV08 490 aa14.94□□□□□ -0.02
CACNB1-206ENST00000539338 CELF6Q96J87 481 aaKnown RBP14.94□□□□□ -0.02
CACNB1-206ENST00000539338 NR1H4Q96RI1 486 aaPredicted RBP14.94□□□□□ -0.02
CACNB1-206ENST00000539338 THUMPD3Q9BV44 507 aaKnown RBP14.94□□□□□ -0.02
CACNB1-206ENST00000539338 BARX2Q9UMQ3 279 aaPredicted RBP14.94□□□□□ -0.02
CACNB1-206ENST00000539338 TIMM13Q9Y5L4 95 aaPredicted RBP14.94□□□□□ -0.02
CACNB1-206ENST00000539338 MICAL2O94851 1124 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 ZCWPW2Q504Y3 356 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 N4BP2L1Q5TBK1 243 aaPredicted RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF786Q8N393 782 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 TDRD5Q8NAT2 981 aaKnown RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 BRD8Q9H0E9 1235 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 F8VP50 259 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 SYNCRIPO60506 623 aaKnown RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 GHRP10912 638 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 GTF2H3Q13889 308 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 FBXO47Q5MNV8 452 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 PPM1LQ5SGD2 360 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 WLSQ5T9L3 541 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 PPP2R2DQ66LE6 453 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 MAP4K3Q8IVH8 894 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 DNAJC19Q96DA6 116 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 P2RX7Q99572 595 aaKnown RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 KCNMB3Q9NPA1 279 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 WWOXQ9NZC7 414 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 PDP2Q9P2J9 529 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 ACOT9Q9Y305 439 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 PCDHB9Q9Y5E1 797 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 WDR27A2RRH5 827 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 SLURP2P0DP57 97 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 SLC2A3P11169 496 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 ACAT1P24752 427 aaKnown RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 FPGSQ05932 587 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 MGAT5Q09328 741 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 KBTBD12Q3ZCT8 623 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 EFL1Q7Z2Z2 1120 aaKnown RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 SCUBE3Q8IX30 993 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 EPS8L1Q8TE68 723 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 EDEM1Q92611 657 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 FAM163AQ96GL9 167 aaPredicted RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF558Q96NG5 402 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 SETD4Q9NVD3 440 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 VANGL2Q9ULK5 521 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 HEATR9A2RTY3 570 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 SHBGP04278 402 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 CNTFP26441 200 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 IZUMO2Q6UXV1 221 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 ATXN2LQ8WWM7 1075 aaKnown RBP14.93□□□□□ -0.02
CACNB1-206ENST00000539338 C3P01024 1663 aa14.93□□□□□ -0.02
CACNB1-206ENST00000539338 KDM1AO60341 852 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 H2AFYO75367 372 aaKnown RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ENDOD1O94919 500 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ALBP02768 609 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 PSMA4P25789 261 aaKnown RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 HORMAD1Q86X24 394 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 LNX1Q8TBB1 728 aaPredicted RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 VCPIP1Q96JH7 1222 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 TINF2Q9BSI4 451 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 HPS4Q9NQG7 708 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ASTN1O14525 1302 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 H3BRB1 525 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 AKAP5P24588 427 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 GRK2P25098 689 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 TRPC1P48995 793 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 SKOR1P84550 965 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 MAP3K10Q02779 954 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ITGA9Q13797 1035 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 CES3Q6UWW8 571 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 PGM2Q96G03 612 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 RIPOR3Q96MK2 946 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 TUT1Q9H6E5 874 aaKnown RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 SAE1Q9UBE0 346 aaPredicted RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 C2orf81A6NN90 581 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 APOA1P02647 267 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 AMPD1P23109 780 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 PRKCIP41743 596 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 KPNB1Q14974 876 aaKnown RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 PATL1Q86TB9 770 aaKnown RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 USP13Q92995 863 aaPredicted RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 FBXO32Q969P5 355 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 IDI2Q9BXS1 227 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 DDX28Q9NUL7 540 aaKnown RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 RHBDL3P58872 404 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 CNTN2Q02246 1040 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 EFEMP1Q12805 493 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF177Q13360 481 aaPredicted RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF268Q14587 947 aaPredicted RBP14.92□□□□□ -0.02
CACNB1-206ENST00000539338 POU6F1Q14863 301 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 DEFB107AQ8IZN7 70 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 RAB42Q8N4Z0 105 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 BAP1Q92560 729 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF333Q96JL9 665 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 GANQ9H2C0 597 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ZNF556Q9HAH1 456 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 GPAMQ9HCL2 828 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 ITGA11Q9UKX5 1188 aa14.92□□□□□ -0.02
CACNB1-206ENST00000539338 CASTOR2A6NHX0 329 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms