RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ZXDBP98169 803 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 ACAP1Q15027 740 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 TRIP4Q15650 581 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-202ENST00000538838 PRDM6Q9NQX0 595 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 ZMYM5Q9UJ78 669 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 CDH7Q9ULB5 785 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 CCL26Q9Y258 94 aa24.46■■□□□ 1.51
TMEM260-202ENST00000538838 F9P00740 461 aa24.45■■□□□ 1.5
TMEM260-202ENST00000538838 COMTP21964 271 aa24.45■■□□□ 1.5
TMEM260-202ENST00000538838 NNTQ13423 1086 aa24.45■■□□□ 1.5
TMEM260-202ENST00000538838 CC2D1AQ6P1N0 951 aaPredicted RBP24.45■■□□□ 1.5
TMEM260-202ENST00000538838 FCRL2Q96LA5 508 aaPredicted RBP24.45■■□□□ 1.5
TMEM260-202ENST00000538838 HBS1LQ9Y450 684 aaKnown RBP24.45■■□□□ 1.5
TMEM260-202ENST00000538838 ALG6Q9Y672 507 aa24.45■■□□□ 1.5
TMEM260-202ENST00000538838 IGLV3-27P01718 113 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 MIPP30301 263 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 GBP2P32456 591 aaPredicted RBP24.44■■□□□ 1.5
TMEM260-202ENST00000538838 SSR1P43307 286 aaKnown RBP24.44■■□□□ 1.5
TMEM260-202ENST00000538838 KCNQ1P51787 676 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 ZC3H12AQ5D1E8 599 aaKnown RBP24.44■■□□□ 1.5
TMEM260-202ENST00000538838 SCYL2Q6P3W7 929 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 SND1Q7KZF4 910 aaKnown RBP eCLIP24.44■■□□□ 1.5
TMEM260-202ENST00000538838 TTC16Q8NEE8 873 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 ADAMTS19Q8TE59 1207 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 USP13Q92995 863 aaPredicted RBP24.44■■□□□ 1.5
TMEM260-202ENST00000538838 RNF34Q969K3 372 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 WBP2Q969T9 261 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 SLC39A13Q96H72 371 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 PEBP4Q96S96 227 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 GDE1Q9NZC3 331 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 ARHGAP26Q9UNA1 814 aa24.44■■□□□ 1.5
TMEM260-202ENST00000538838 SP100P23497 879 aaPredicted RBP24.43■■□□□ 1.5
TMEM260-202ENST00000538838 CXCR3P49682 368 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 TAS2R40P59535 323 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 LEXMQ3ZCV2 418 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 ARID3BQ8IVW6 561 aaPredicted RBP24.43■■□□□ 1.5
TMEM260-202ENST00000538838 ALS2CR12Q96Q35 445 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 TDP1Q9NUW8 608 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 PCSK1NQ9UHG2 260 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 SPOPO43791 374 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 STC2O76061 302 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 FTCDO95954 541 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 PCK1P35558 622 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 SLC1A1P43005 524 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 KPNA1P52294 538 aaPredicted RBP24.43■■□□□ 1.5
TMEM260-202ENST00000538838 COG7P83436 770 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 TFF2Q03403 129 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 FAM78AQ5JUQ0 283 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 SLFN11Q7Z7L1 901 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 CCDC185Q8N715 623 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 RIN3Q8TB24 985 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 PLD4Q96BZ4 506 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 ASB16Q96NS5 453 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 ANLNQ9NQW6 1124 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 TMPRSS4Q9NRS4 437 aa24.43■■□□□ 1.5
TMEM260-202ENST00000538838 LEFTY2O00292 366 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 MOCS2O96007 188 aaPredicted RBP24.42■■□□□ 1.5
TMEM260-202ENST00000538838 IL1R2P27930 398 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 CCR1P32246 355 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 SLC25A11Q02978 314 aaKnown RBP24.42■■□□□ 1.5
TMEM260-202ENST00000538838 RING1Q06587 406 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 TXNRD3NBQ6F5E7 133 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 CYP4V2Q6ZWL3 525 aaPredicted RBP24.42■■□□□ 1.5
TMEM260-202ENST00000538838 ZSCAN30Q86W11 494 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 SYCE1Q8N0S2 351 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 ST13P5Q8NFI4 369 aaPredicted RBP24.42■■□□□ 1.5
TMEM260-202ENST00000538838 SH3RF2Q8TEC5 729 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 WDCPQ9H6R7 721 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 CFAP97Q9P2B7 532 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 USP18Q9UMW8 372 aa24.42■■□□□ 1.5
TMEM260-202ENST00000538838 I6L893 689 aaPredicted RBP24.41■■□□□ 1.5
TMEM260-202ENST00000538838 SCAMP3O14828 347 aaKnown RBP24.41■■□□□ 1.5
TMEM260-202ENST00000538838 KIF5CO60282 957 aa24.41■■□□□ 1.5
TMEM260-202ENST00000538838 GJC1P36383 396 aa24.41■■□□□ 1.5
TMEM260-202ENST00000538838 PPP2R5DQ14738 602 aa24.41■■□□□ 1.5
TMEM260-202ENST00000538838 ZNF569Q5MCW4 686 aa24.41■■□□□ 1.5
TMEM260-202ENST00000538838 TRIM58Q8NG06 486 aa24.41■■□□□ 1.5
TMEM260-202ENST00000538838 SMARCD2Q92925 531 aa24.41■■□□□ 1.5
TMEM260-202ENST00000538838 TKTL2Q9H0I9 626 aa24.41■■□□□ 1.5
TMEM260-202ENST00000538838 KIF26AQ9ULI4 1882 aaPredicted RBP24.41■■□□□ 1.5
TMEM260-202ENST00000538838 COL6A3P12111 3177 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 PRPSAP2O60256 369 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 APOEP02649 317 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 TNNT1P13805 278 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 WEE1P30291 646 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 CORO1AP31146 461 aaKnown RBP24.4■■□□□ 1.5
TMEM260-202ENST00000538838 USP4Q13107 963 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 SMTNL2Q2TAL5 461 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 BRMS1LQ5PSV4 323 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 PEX26Q7Z412 305 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 NT5DC3Q86UY8 548 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 NCAPGQ9BPX3 1015 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 ZWILCHQ9H900 591 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.4■■□□□ 1.5
TMEM260-202ENST00000538838 ARHGEF38Q9NXL2 777 aa24.4■■□□□ 1.5
TMEM260-202ENST00000538838 XPO7Q9UIA9 1087 aaKnown RBP24.4■■□□□ 1.5
TMEM260-202ENST00000538838 PACSIN2Q9UNF0 486 aaPredicted RBP24.4■■□□□ 1.5
TMEM260-202ENST00000538838 KCNU1A8MYU2 1149 aa24.39■■□□□ 1.5
TMEM260-202ENST00000538838 LAMP2P13473 410 aa24.39■■□□□ 1.5
TMEM260-202ENST00000538838 FCARP24071 287 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms