RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 STRIP2Q9ULQ0 834 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 NAALADL1Q9UQQ1 740 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 STARD13Q9Y3M8 1113 aa14.31□□□□□ -0.12
CD9-208ENST00000538834 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
CD9-208ENST00000538834 TNRC6BQ9UPQ9 1833 aaKnown RBP14.3□□□□□ -0.12
CD9-208ENST00000538834 TULP3O75386 442 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 GFPT2O94808 682 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 MMEP08473 750 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 UNGP13051 313 aaPredicted RBP14.3□□□□□ -0.12
CD9-208ENST00000538834 CHKAP35790 457 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 STAT1P42224 750 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 TNFRSF4P43489 277 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 CCR3P51677 355 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 GSCP56915 257 aaPredicted RBP14.3□□□□□ -0.12
CD9-208ENST00000538834 CDR2Q01850 454 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 PTP4A2Q12974 167 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 NFKBIBQ15653 356 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 EFHC1Q5JVL4 640 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 FAM183BPQ6ZVS7 135 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 ZDHHC17Q8IUH5 632 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 PASD1Q8IV76 773 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 TMEM35BQ8NCS4 154 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 NEK11Q8NG66 645 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 USP33Q8TEY7 942 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 RNF139Q8WU17 664 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 PNKPQ96T60 521 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 FAM126AQ9BYI3 521 aaPredicted RBP14.3□□□□□ -0.12
CD9-208ENST00000538834 ADAM33Q9BZ11 813 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 EDEM3Q9BZQ6 932 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 POPDC2Q9HBU9 364 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 ST7Q9NRC1 585 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 SPATA6Q9NWH7 488 aaPredicted RBP14.3□□□□□ -0.12
CD9-208ENST00000538834 WDR35Q9P2L0 1181 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 TLR6Q9Y2C9 796 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 SLC27A6Q9Y2P4 619 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 ZFHX2Q9C0A1 2572 aaPredicted RBP14.3□□□□□ -0.12
CD9-208ENST00000538834 GPR179Q6PRD1 2367 aa14.3□□□□□ -0.12
CD9-208ENST00000538834 EP300Q09472 2414 aaPredicted RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 IRAK2O43187 625 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 MSI1O43347 362 aaKnown RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 LAMTOR5O43504 91 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 NCAM1P13591 858 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 TYRP14679 529 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 PITX1P78337 314 aaPredicted RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 SATB1Q01826 763 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 SLC6A3Q01959 620 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 FAM133BQ5BKY9 247 aaKnown RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 ARTNQ5T4W7 220 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 OTUD1Q5VV17 481 aaPredicted RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 RSRC2Q7L4I2 434 aaKnown RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 KIAA0907Q7Z7F0 614 aaPredicted RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 XYLT1Q86Y38 959 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 DENND1CQ8IV53 801 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 KCNV2Q8TDN2 545 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 PCDHB18PQ96TA0 734 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 TRIM62Q9BVG3 475 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 TMEM59LQ9UK28 342 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 THADAQ6YHU6 1953 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 SDK1Q7Z5N4 2213 aa14.29□□□□□ -0.12
CD9-208ENST00000538834 PTPRZ1P23471 2315 aaPredicted RBP14.29□□□□□ -0.12
CD9-208ENST00000538834 CCDC163A0A0D9SF12 145 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 KCNU1A8MYU2 1149 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.28□□□□□ -0.12
CD9-208ENST00000538834 TRIM24O15164 1050 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 HSF2BPO75031 334 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 RNF40O75150 1001 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 KAT7O95251 611 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 MMP8P22894 467 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
CD9-208ENST00000538834 GRIA2P42262 883 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 PI4KAP42356 2102 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 CXCL12P48061 93 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 ZNF445P59923 1031 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 MRPS21P82921 87 aaKnown RBP14.28□□□□□ -0.12
CD9-208ENST00000538834 FANCCQ00597 558 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 MPP7Q5T2T1 576 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 ADGRF1Q5T601 910 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 NADSYN1Q6IA69 706 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 TRNP1Q6NT89 227 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 SYT13Q7L8C5 426 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 TAC4Q86UU9 113 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 TERB1Q8NA31 727 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 TTC16Q8NEE8 873 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 PGAP3Q96FM1 320 aaPredicted RBP14.28□□□□□ -0.12
CD9-208ENST00000538834 LMLNQ96KR4 655 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 SERPINB11Q96P15 392 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 NOX5Q96PH1 765 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 NPY6RQ99463 290 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 BBS2Q9BXC9 721 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 CD248Q9HCU0 757 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 AIPL1Q9NZN9 384 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 CALCOCO1Q9P1Z2 691 aa14.28□□□□□ -0.12
CD9-208ENST00000538834 GVINP1Q7Z2Y8 2422 aa14.27□□□□□ -0.12
CD9-208ENST00000538834 TCRBV5S1A1TA0A578 114 aa14.27□□□□□ -0.13
CD9-208ENST00000538834 DAB1O75553 588 aa14.27□□□□□ -0.13
CD9-208ENST00000538834 TRUB2O95900 331 aaKnown RBP14.27□□□□□ -0.13
CD9-208ENST00000538834 HMBSP08397 361 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms