RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SLC32A1Q9H598 525 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 LRRC4Q9HBW1 653 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 GDPD2Q9HCC8 539 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 METTL14Q9HCE5 456 aaKnown RBP9.06□□□□□ -0.96
DDB1-212ENST00000538470 MARCH2Q9P0N8 246 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SUSD2Q9UGT4 822 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 ARMCX3Q9UH62 379 aaPredicted RBP9.06□□□□□ -0.96
DDB1-212ENST00000538470 NUDT5Q9UKK9 219 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 TSPAN16Q9UKR8 245 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 KIAA1257Q9ULG3 409 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 SLC6A14Q9UN76 642 aa9.06□□□□□ -0.96
DDB1-212ENST00000538470 HBS1LQ9Y450 684 aaKnown RBP9.06□□□□□ -0.96
DDB1-212ENST00000538470 ATXN2Q99700 1313 aaKnown RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 TP53BP1Q12888 1972 aaPredicted RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 O00370 1275 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 PMM2O15305 246 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 KLKB1P03952 638 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 CFIP05156 583 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 PAEPP09466 180 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 VDRP11473 427 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 ITPKAP23677 461 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 WASP42768 502 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 TKTL1P51854 596 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 ATXN3P54252 364 aaPredicted RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 NUCB2P80303 420 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 ZNF33AQ06730 810 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 PDE4CQ08493 712 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 STILQ15468 1287 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 TRIP4Q15650 581 aaPredicted RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 SYCP2LQ5T4T6 812 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 KIAA1211LQ6NV74 962 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 FOXR2Q6PJQ5 311 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 BHLHA9Q7RTU4 235 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 ELOA2Q8IYF1 753 aaPredicted RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 SIX6OS1Q8N1H7 587 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 UBR7Q8N806 425 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 FRMD1Q8N878 549 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 ZNF557Q8N988 423 aaPredicted RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 WFIKKN2Q8TEU8 576 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 RNF139Q8WU17 664 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 KCTD13Q8WZ19 329 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 BHMTQ93088 406 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 SLC35C1Q96A29 364 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 EEF2KMTQ96G04 330 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 MRGPRX1Q96LB2 322 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 CEP63Q96MT8 703 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 ACOX2Q99424 681 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 IRX2Q9BZI1 471 aaPredicted RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 ULBP1Q9BZM6 244 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 CAPN10Q9HC96 672 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 TMEM74BQ9NUR3 256 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 CACNA2D2Q9NY47 1150 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 PLK2Q9NYY3 685 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 THAP10Q9P2Z0 257 aaPredicted RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 STOML2Q9UJZ1 356 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 AGO1Q9UL18 857 aaKnown RBP9.05□□□□□ -0.96
DDB1-212ENST00000538470 CYP8B1Q9UNU6 501 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 NFE2L3Q9Y4A8 694 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 STON1Q9Y6Q2 735 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 FAM208BQ5VWN6 2430 aa9.05□□□□□ -0.96
DDB1-212ENST00000538470 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 P4HA2O15460 535 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 NDUFS2O75306 463 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 SYPP08247 313 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 HMBSP08397 361 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 ANP32AP39687 249 aaKnown RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 MAPK8P45983 427 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 FMO5P49326 533 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 HARS2P49590 506 aaKnown RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 GFPT1Q06210 699 aaPredicted RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 ADIGQ0VDE8 80 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 CETN1Q12798 172 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 HNRNPDQ14103 355 aaKnown RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 GEN1Q17RS7 908 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 UAP1L1Q3KQV9 507 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 FUT11Q495W5 492 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 PKDCCQ504Y2 493 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 MPPE1Q53F39 396 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 WDR45BQ5MNZ6 344 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 ANKRD40Q6AI12 368 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 MSANTD2Q6P1R3 559 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 KIAA1324Q6UXG2 1013 aaKnown RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 DENND1CQ8IV53 801 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 HDDC3Q8N4P3 179 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 TRIML1Q8N9V2 468 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 ENGASEQ8NFI3 743 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 IRGQQ8WZA9 623 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 TATDN2Q93075 761 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 DHTKD1Q96HY7 919 aaPredicted RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 PIWIL1Q96J94 861 aaKnown RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 HSPA12BQ96MM6 686 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 NT5C1BQ96P26 610 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 IPO9Q96P70 1041 aaKnown RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 FBRSQ9HAH7 460 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 PRDM16Q9HAZ2 1276 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 CNGB3Q9NQW8 809 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 ABCC13Q9NSE7 274 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 USP36Q9P275 1121 aaKnown RBP9.04□□□□□ -0.96
DDB1-212ENST00000538470 RAD54BQ9Y620 910 aa9.04□□□□□ -0.96
DDB1-212ENST00000538470 CHD6Q8TD26 2715 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms