RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
SMARCA4-206ENST00000538456 KIAA1522Q9P206 1035 aaPredicted RBP14.72□□□□□ -0.05
SMARCA4-206ENST00000538456 CGNQ9P2M7 1197 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-206ENST00000538456 RASAL2Q9UJF2 1139 aa14.72□□□□□ -0.05
SMARCA4-206ENST00000538456 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
SMARCA4-206ENST00000538456 TP53BP1Q12888 1972 aaPredicted RBP14.72□□□□□ -0.05
SMARCA4-206ENST00000538456 FAM149AA5PLN7 773 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 EIF4E1BA6NMX2 242 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 NPC1O15118 1278 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 FLRT2O43155 660 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 EPHX1P07099 455 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 TRIM21P19474 475 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 PIK3CAP42336 1068 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 COPAP53621 1224 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 CYP4F3Q08477 520 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 ENPP2Q13822 863 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 SHC4Q6S5L8 630 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 SERPINA13PQ6UXR4 307 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 SCD5Q86SK9 330 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 TADA2BQ86TJ2 420 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 CYFIP2Q96F07 1278 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 HNRNPABQ99729 332 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 CDC6Q99741 560 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 NUP58Q9BVL2 599 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 CLEC4EQ9ULY5 219 aa14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.71□□□□□ -0.05
SMARCA4-206ENST00000538456 POLR2DO15514 142 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 STX6O43752 255 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 IGLV3-19P01714 112 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 RALAP11233 206 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 CHKAP35790 457 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 AFMP43652 599 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 AFF3P51826 1226 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 ZNF132P52740 706 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 ARID5AQ03989 594 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 EFEMP1Q12805 493 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 CUL4BQ13620 913 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 KIF19Q2TAC6 998 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 ZACNQ401N2 412 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 LAYNQ6UX15 382 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 DENND1CQ8IV53 801 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 GRAMD1CQ8IYS0 662 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 GOLGA5Q8TBA6 731 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 CRELD1Q96HD1 420 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 PIWIL1Q96J94 861 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 ZSCAN16Q9H4T2 348 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 C6orf106Q9H6K1 298 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 SCUBE2Q9NQ36 999 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 ELOVL2Q9NXB9 296 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 AGO1Q9UL18 857 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 ZNF510Q9Y2H8 683 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 SNX11Q9Y5W9 270 aa14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 HELZ2Q9BYK8 2649 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-206ENST00000538456 TRABD2BA6NFA1 517 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 PPP6R2O75170 966 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 ZIC2O95409 532 aaPredicted RBP14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 ASS1P00966 412 aaKnown RBP14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 HLA-DRAP01903 254 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 CYBBP04839 570 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 RPN1P04843 607 aaKnown RBP14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 HLA-EP13747 358 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 CD58P19256 250 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 KIF11P52732 1056 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 COG7P83436 770 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 TMEM215Q68D42 235 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 SV2AQ7L0J3 742 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 CCDC186Q7Z3E2 898 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 GALNT15Q8N3T1 639 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 ZNF366Q8N895 744 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 C1orf216Q8TAB5 229 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 DDI1Q8WTU0 396 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 TAF4BQ92750 862 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 NT5C1AQ9BXI3 368 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 MAGEF1Q9HAY2 307 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 PNPLA8Q9NP80 782 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 PCDHGB2Q9Y5G2 931 aa14.69□□□□□ -0.06
SMARCA4-206ENST00000538456 MUC22E2RYF6 1773 aaPredicted RBP14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 KCNK3O14649 394 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 CUTAO60888 179 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 DKK1O94907 266 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 ACSL1P33121 698 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 PSEN1P49768 467 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 IL9RQ01113 521 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 INCA1Q0VD86 236 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 SUZ12Q15022 739 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 EIF4HQ15056 248 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 FNDC3BQ53EP0 1204 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 CEP135Q66GS9 1140 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 DBX2Q6ZNG2 339 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 RSRC2Q7L4I2 434 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 CDK5RAP1Q96SZ6 601 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 DCLK3Q9C098 648 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 LHX5Q9H2C1 402 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 CLIC5Q9NZA1 410 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 DKK4Q9UBT3 224 aa14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.68□□□□□ -0.06
SMARCA4-206ENST00000538456 SHROOM3Q8TF72 1996 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 PVALEFA0A1B0GWK0 134 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 NR3C1P04150 777 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms