RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 BRCA2P51587 3418 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 A0A0G2JMZ2 1700 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 DDX39AO00148 427 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 LIASO43766 372 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 PSMD10O75832 226 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 EIF2S1P05198 315 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 KITP10721 976 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 CDKL1Q00532 357 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 ADGRE1Q14246 886 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 HIF1AQ16665 826 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 ARHGEF16Q5VV41 709 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 NANOGP8Q6NSW7 305 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 GPAT2Q6NUI2 795 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 DRICH1Q6PGQ1 229 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 GPR180Q86V85 440 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 FAM71AQ8IYT1 594 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 SLC7A5P1Q8MH63 180 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 IKZF4Q9H2S9 585 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 GBA2Q9HCG7 927 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 PALMDQ9NP74 551 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 KCNH7Q9NS40 1196 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 SPO11Q9Y5K1 396 aa11.72□□□□□ -0.53
SEMA4D-221ENST00000537934 FAM189A1O60320 539 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 GAS7O60861 476 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 BANF1O75531 89 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 SULT1C4O75897 302 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 PIAS1O75925 651 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 C8BP07358 591 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 GAP43P17677 238 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 PSMC3P17980 439 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 BFSP1Q12934 665 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 PDK1Q15118 436 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 TEX44Q53QW1 395 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 C6orf183Q5T699 404 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 ACAD10Q6JQN1 1059 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 OTOP1Q7RTM1 612 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 DEFB107AQ8IZN7 70 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 ANKRD36BP1Q96IX9 119 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 NSMCE3Q96MG7 304 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 GNPTGQ9UJJ9 305 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
SEMA4D-221ENST00000537934 A0A1B0GTW7 788 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 H6PDO95479 791 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 CAPNS1P04632 268 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 SPATA31C1P0DKV0 1188 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 PABPC1P11940 636 aaKnown RBP11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 ETS1P14921 441 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 CETN1Q12798 172 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 CYTH1Q15438 398 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 SLC47A2Q86VL8 602 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 SAMD3Q8N6K7 520 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 HSPH1Q92598 858 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 ISOC1Q96CN7 298 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 KCNK16Q96T55 309 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 EBF4Q9BQW3 602 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 UNKQ9C0B0 810 aaKnown RBP11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 BCAS3Q9H6U6 928 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 CYP4F11Q9HBI6 524 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 MARCOQ9UEW3 520 aaPredicted RBP11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 RIMS3Q9UJD0 308 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 LCTP09848 1927 aa11.71□□□□□ -0.54
SEMA4D-221ENST00000537934 PSTPIP1O43586 416 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 CLASP2O75122 1294 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 CNMDO75829 334 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 STAMBPO95630 424 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 INHBBP09529 407 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 CYP2C8P10632 490 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 ITGAXP20702 1163 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 CYP2J2P51589 502 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 SPOPLQ6IQ16 392 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 C16orf87Q6PH81 154 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 DENND5BQ6ZUT9 1274 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 GSDMBQ8TAX9 411 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 NLRP7Q8WX94 980 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 SREK1Q8WXA9 508 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 CCDC68Q9H2F9 335 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 HIPK3Q9H422 1215 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 SIRPGQ9P1W8 387 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 DNPEPQ9ULA0 475 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 UBIAD1Q9Y5Z9 338 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 A0A0B4J269 797 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 COPEO14579 308 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 XPO1O14980 1071 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 MCF2LO15068 1137 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 SNNO75324 88 aaPredicted RBP11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 SLITRK3O94933 977 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 BMP10O95393 424 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 NR3C2P08235 984 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 TSHRP16473 764 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 PTPN2P17706 415 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 RPA1P27694 616 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 CNTN2Q02246 1040 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 PTK7Q13308 1070 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 TUBB3Q13509 450 aa11.7□□□□□ -0.54
SEMA4D-221ENST00000537934 MTMR1Q13613 665 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms