RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 MYLKQ15746 1914 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 ANKRD17O75179 2603 aaKnown RBP9.68□□□□□ -0.86
USP28-205ENST00000537706 A0A0B4J269 797 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 GABRDO14764 452 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 TNFSF15O95150 251 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 WNT1P04628 370 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 CYBBP04839 570 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 IGHV4-34P06331 123 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 CKMT1AP12532 417 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 PRKCHP24723 683 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 MFAP3P55082 362 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 OXCT1P55809 520 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 MAPK7Q13164 816 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 STK3Q13188 491 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 ORC2Q13416 577 aaPredicted RBP9.68□□□□□ -0.86
USP28-205ENST00000537706 CAMK2GQ13555 558 aaPredicted RBP9.68□□□□□ -0.86
USP28-205ENST00000537706 FNDC3BQ53EP0 1204 aaKnown RBP9.68□□□□□ -0.86
USP28-205ENST00000537706 MANEAQ5SRI9 462 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 FHL5Q5TD97 284 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 HS2ST1Q7LGA3 356 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 TMC6Q7Z403 805 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 OSTM1Q86WC4 334 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 TPCN2Q8NHX9 752 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 BHMTQ93088 406 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 SERAC1Q96JX3 654 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 ORAI3Q9BRQ5 295 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 RUSC1Q9BVN2 902 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 ELOVL4Q9GZR5 314 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 TMEM60Q9H2L4 133 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 GDAP2Q9NXN4 497 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 FBXO10Q9UK96 956 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 PLA2G4CQ9UP65 541 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 ZNF510Q9Y2H8 683 aa9.68□□□□□ -0.86
USP28-205ENST00000537706 ATP8B3O60423 1300 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 MYO18AQ92614 2054 aaKnown RBP9.67□□□□□ -0.86
USP28-205ENST00000537706 CABIN1Q9Y6J0 2220 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
USP28-205ENST00000537706 LZTS3O60299 673 aaPredicted RBP9.67□□□□□ -0.86
USP28-205ENST00000537706 FAM189A1O60320 539 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 RNASEH1O60930 286 aaKnown RBP9.67□□□□□ -0.86
USP28-205ENST00000537706 PIGRP01833 764 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 PSMC1P62191 440 aaKnown RBP9.67□□□□□ -0.86
USP28-205ENST00000537706 TFAMQ00059 246 aaKnown RBP9.67□□□□□ -0.86
USP28-205ENST00000537706 TRIM29Q14134 588 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 ADALQ6DHV7 355 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 C1orf186Q6ZWK4 172 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 C14orf80Q86SX3 495 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 OR4C6Q8NH72 309 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 OSBPL2Q9H1P3 480 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 COMMD8Q9NX08 183 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 SNX14Q9Y5W7 946 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 NOTCH2Q04721 2471 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 UBR5O95071 2799 aaPredicted RBP9.67□□□□□ -0.86
USP28-205ENST00000537706 TMEM131Q92545 1883 aa9.67□□□□□ -0.86
USP28-205ENST00000537706 A0A1W2PR77 199 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 VPS37CA5D8V6 355 aaPredicted RBP9.66□□□□□ -0.86
USP28-205ENST00000537706 E9PMD0 336 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 TRIM38O00635 465 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 ITGB3P05106 788 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 ITGA2BP08514 1039 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 KRT19P08727 400 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 CHKAP35790 457 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 ACOT2P49753 483 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 CCR5P51681 352 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 RPS14P62263 151 aaKnown RBP9.66□□□□□ -0.86
USP28-205ENST00000537706 RBP5P82980 135 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 OVGP1Q12889 678 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 SNX30Q5VWJ9 437 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 KRT79Q5XKE5 535 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 OR2T34Q8NGX1 318 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 MYCBPAPQ8TBZ2 947 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 TNFRSF25Q93038 417 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 CCSER2Q9H7U1 834 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 PLK2Q9NYY3 685 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 SUN2Q9UH99 717 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 CHORDC1Q9UHD1 332 aaPredicted RBP9.66□□□□□ -0.86
USP28-205ENST00000537706 TUBD1Q9UJT1 453 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 ITGA11Q9UKX5 1188 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 CCDC187A0A096LP49 1063 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 ATP2C2O75185 946 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 NCKAP1LP55160 1127 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 CCDC142Q17RM4 750 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 MDH1BQ5I0G3 518 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 NAPEPLDQ6IQ20 393 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 RBM44Q6ZP01 1051 aaKnown RBP9.66□□□□□ -0.86
USP28-205ENST00000537706 JAMLQ86YT9 394 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 CSGALNACT2Q8N6G5 542 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 MFSD2AQ8NA29 543 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 SSC4DQ8WTU2 575 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 ATXN7L3BQ96GX2 97 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 SNX25Q9H3E2 840 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 NCKIPSDQ9NZQ3 722 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 KCND2Q9NZV8 630 aa9.66□□□□□ -0.86
USP28-205ENST00000537706 AGO2Q9UKV8 859 aaKnown RBP9.66□□□□□ -0.86
USP28-205ENST00000537706 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms