RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SLC38A10Q9HBR0 1119 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 EXOC7Q9UPT5 735 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 NUP98P52948 1817 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 M0QX08 132 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 GUCY1B2O75343 617 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 MYO1DO94832 1006 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 COASYQ13057 564 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 GRIK5Q16478 980 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 KLHL38Q2WGJ6 581 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 NANOGP8Q6NSW7 305 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 CHSY1Q86X52 802 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 CHST13Q8NET6 341 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 LNX1Q8TBB1 728 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 OSCP1Q8WVF1 389 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 ERLEC1Q96DZ1 483 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 NENFQ9UMX5 172 aa11.21□□□□□ -0.61
CLSTN3-207ENST00000537408 CAPN14A8MX76 684 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 BGNP21810 368 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 EEF1DP29692 281 aaKnown RBP11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 THOP1P52888 689 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 TPTEP56180 551 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 GPC5P78333 572 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 TMPRSS15P98073 1019 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 FAM110CQ1W6H9 321 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 FBXO27Q8NI29 283 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 ATP2A3Q93084 1043 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 ARHGEF26Q96DR7 871 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 CDHR1Q96JP9 859 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 DDX4Q9NQI0 724 aaKnown RBP11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 PRDM5Q9NQX1 630 aaPredicted RBP11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 CDH7Q9ULB5 785 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 SF3B1O75533 1304 aaKnown RBP eCLIP11.21□□□□□ -0.622e-6■■■■■ 160.8
CLSTN3-207ENST00000537408 C1orf232A0A0U1RR37 186 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 CLDN3O15551 220 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 BMP10O95393 424 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 SERPINA6P08185 405 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 STX1BP61266 288 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 KCNC4Q03721 635 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 FBXO46Q6PJ61 603 aaPredicted RBP11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 RNF19BQ6ZMZ0 732 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 ZCCHC9Q8N567 271 aaKnown RBP11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF420Q8TAQ5 688 aaPredicted RBP11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 RAD54LQ92698 747 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 RMDN1Q96DB5 314 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 KCNK13Q9HB14 408 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 CDH22Q9UJ99 828 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 PCDHA12Q9UN75 941 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC8A2Q9UPR5 921 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC30A1Q9Y6M5 507 aa11.21□□□□□ -0.62
CLSTN3-207ENST00000537408 EMSYQ7Z589 1322 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ILVBLA1L0T0 632 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TESPA1A2RU30 521 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 C2orf71A6NGG8 1288 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 FOSP01100 380 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 DDX5P17844 614 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 SERPINB1P30740 379 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 SNAP25P60880 206 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 PDK1Q15118 436 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 SETD3Q86TU7 594 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 CLEC10AQ8IUN9 316 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ARID3BQ8IVW6 561 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 GIPC2Q8TF65 315 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TRIM63Q969Q1 353 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 TMIGD2Q96BF3 282 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ACAP3Q96P50 834 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 PGAP2Q9UHJ9 254 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 A0A1W2PPM1 405 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 J3QRK9 145 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 MAN1A2O60476 641 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 NDUFB10O96000 172 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 C8BP07358 591 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 S100A5P33763 92 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 CRHR2Q13324 411 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ADGRE1Q14246 886 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 SEC23AQ15436 765 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 DCLRE1AQ6PJP8 1040 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 PAOXQ6QHF9 649 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 XKR5Q6UX68 686 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 RFPL4BQ6ZWI9 263 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 PDPRQ8NCN5 879 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 FBXL8Q96CD0 374 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 CMTM5Q96DZ9 223 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 XAB2Q9HCS7 855 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 SACM1LQ9NTJ5 587 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 POMPQ9Y244 141 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 IQANK1A0A1B0GTG1 560 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 GAS7O60861 476 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ARL1P40616 181 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 MARCKSL1P49006 195 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 HADHBP55084 474 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 ATP6V0D1P61421 351 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 GRM4Q14833 912 aa11.2□□□□□ -0.62
CLSTN3-207ENST00000537408 BOLA3Q53S33 107 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms