RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HMG20AQ9NP66 347 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SYBUQ9NX95 663 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 LAMB4A4D0S4 1761 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 KIF13AQ9H1H9 1805 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 DNALI1O14645 258 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 PHGDHO43175 533 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SLC37A4O43826 429 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 APRTP07741 180 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 DLGAP5Q15398 846 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 PQLC1Q8N2U9 271 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SUCOQ9UBS9 1254 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SLC8A2Q9UPR5 921 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CDY2AQ9Y6F7 541 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CDY1Q9Y6F8 540 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 APOL1O14791 398 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 ZMPSTE24O75844 475 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CASP4P49662 377 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 KRT76Q01546 638 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 UBAP2LQ14157 1087 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 TFDP1Q14186 410 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 HLFQ16534 295 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 ERFEQ4G0M1 354 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 STXBP5Q5T5C0 1151 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 TLK2Q86UE8 772 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CHURC1Q8WUH1 139 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 TRUB1Q8WWH5 349 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SLC5A5Q92911 643 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 YIPF2Q9BWQ6 316 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 HIPK3Q9H422 1215 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 A0A088AWK7 358 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 DENND3A2RUS2 1198 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 BMP10O95393 424 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 JAK1P23458 1154 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 PSMA4P25789 261 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 NME5P56597 212 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 EPHA7Q15375 998 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 OGFRL1Q5TC84 451 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 BHLHE22Q8NFJ8 381 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 HGH1Q9BTY7 390 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 TRIM39Q9HCM9 518 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CHST7Q9NS84 486 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 VPS28Q9UK41 221 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 WASF2Q9Y6W5 498 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SF3B1O75533 1304 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 EVPLLA8MZ36 301 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CST8O60676 142 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 C6orf10Q5SRN2 563 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 RC3H1Q5TC82 1133 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 LRRC38Q5VT99 294 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 ACTRT2Q8TDY3 377 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 POP5Q969H6 163 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 WNK4Q96J92 1243 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SRPK1Q96SB4 655 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 GPATCH1Q9BRR8 931 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 TDRD1Q9BXT4 1180 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 NACA2Q9H009 215 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 USP29Q9HBJ7 922 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 EXOSC4Q9NPD3 245 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 EFR3BQ9Y2G0 817 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 H2AFYO75367 372 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 GSNP06396 782 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 STIP1P31948 543 aaKnown RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 FOXN2P32314 431 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 PKNOX1P55347 436 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 KCNA1Q09470 495 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 MTMR2Q13614 643 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 FUT11Q495W5 492 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 UGT2A3Q6UWM9 527 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 ANGPTL8Q6UXH0 198 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CYP2R1Q6VVX0 501 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 C11orf74Q86VG3 221 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF410Q86VK4 478 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 BEST2Q8NFU1 509 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 EXD1Q8NHP7 514 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 KIAA1586Q9HCI6 787 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SLC7A8Q9UHI5 535 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 AP4B1Q9Y6B7 739 aa5.55□□□□□ -1.52
PTPRD-213ENST00000537002 SIPA1L3O60292 1781 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-213ENST00000537002 TTLL13PA6NNM8 815 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 BANF1O75531 89 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CSPG5O95196 566 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 GH1P01241 217 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 MGAT5Q09328 741 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ABCB5Q2M3G0 1257 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CTC1Q2NKJ3 1217 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ZBED5Q49AG3 693 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 CEP78Q5JTW2 689 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 KBTBD2Q8IY47 623 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 ADGRF4Q8IZF3 695 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 GSTCDQ8NEC7 633 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 VCPIP1Q96JH7 1222 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 PPP1R16BQ96T49 567 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 MIPEPQ99797 713 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 TMEM121Q9BTD3 319 aa5.54□□□□□ -1.52
PTPRD-213ENST00000537002 INO80BQ9C086 356 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-213ENST00000537002 MEGF6O75095 1541 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms