RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 RFC1P35251 1148 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 STAT4Q14765 748 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SHHQ15465 462 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PSMD5Q16401 504 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ANKS1BQ7Z6G8 1248 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SPATA2LQ8IUW3 424 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TNS4Q8IZW8 715 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 NIPA2Q8N8Q9 360 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ANKS4BQ8N8V4 417 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ATAD1Q8NBU5 361 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PRMT1Q99873 361 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 NSRP1Q9H0G5 558 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SPG21Q9NZD8 308 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 STRIP2Q9ULQ0 834 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 HHLA1C9JL84 531 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 LIASO43766 372 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TBC1D4O60343 1298 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 FGF18O76093 207 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SOD2P04179 222 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GSTA1P08263 222 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PPARDQ03181 441 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KYNUQ16719 465 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 IZUMO3Q5VZ72 239 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 VSTM1Q6UX27 236 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RNF19BQ6ZMZ0 732 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RIBC1Q8N443 379 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ZCCHC9Q8N567 271 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MCRS1Q96EZ8 462 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLITRK1Q96PX8 696 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RAD9AQ99638 391 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DNAI2Q9GZS0 605 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 EURLQ9NYK6 297 aa13.45□□□□□ -0.26
CDK5RAP3-202ENST00000536708 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 NDC80O14777 642 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DNAJC8O75937 253 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TJP3O95049 919 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GLUD2P49448 558 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ROR1Q01973 937 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 IFRD2Q12894 506 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 PIGHQ14442 188 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TRIP13Q15645 432 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DCUN1D2Q6PH85 259 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ANKS3Q6ZW76 656 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TMEM110Q86TL2 294 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 VPS52Q8N1B4 723 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KLHL23Q8NBE8 558 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GPR152Q8TDT2 470 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CLP1Q92989 425 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DMAP1Q9NPF5 467 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SAMD15Q9P1V8 674 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MTRRQ9UBK8 725 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MYO9BQ13459 2157 aa13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 COL4A4P53420 1690 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MTMR11A4FU01 709 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CDH16O75309 829 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 OAS1P00973 400 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 KRT3P12035 628 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 OR1D2P34982 312 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CTNNB1P35222 781 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SCTRP47872 440 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 RPL34P49207 117 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TKTL1P51854 596 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ADCY1Q08828 1119 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 XRCC4Q13426 336 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SNCBQ16143 134 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SPRED3Q2MJR0 410 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 WLSQ5T9L3 541 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 FBXO22Q8NEZ5 403 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 GIMAP7Q8NHV1 300 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 STK32AQ8WU08 396 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CCDC77Q9BR77 488 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 HERC2P3Q9BVR0 1158 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 CSNK1G1Q9HCP0 422 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 USTQ9Y2C2 406 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 EFR3BQ9Y2G0 817 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLC27A5Q9Y2P5 690 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 OBSL1O75147 1896 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TMEM120BA0PK00 339 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 LINC01553A4QN01 128 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 OR6C75A6NL08 312 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SNX3O60493 162 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 TFE3P19532 575 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SLC8A3P57103 927 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 ZNF268Q14587 947 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DDR2Q16832 855 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SH3PXD2AQ5TCZ1 1133 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 MFSD7Q6UXD7 560 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 SPOCD1Q6ZMY3 1216 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 C4orf50Q6ZRC1 276 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 HFE2Q6ZVN8 426 aa13.43□□□□□ -0.26
CDK5RAP3-202ENST00000536708 DDX53Q86TM3 631 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms