RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 NR2C2P49116 596 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 HDAC4P56524 1084 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 COG7P83436 770 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 OGDHQ02218 1023 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 ZNF33AQ06730 810 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 GPM6BQ13491 265 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CAMK1Q14012 370 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TFDP2Q14188 446 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CYP1B1Q16678 543 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 DCAF6Q58WW2 860 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 SEL1L2Q5TEA6 688 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 BTBD8Q5XKL5 378 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 NUGGCQ68CJ6 796 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 BZW1Q7L1Q6 419 aaKnown RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 GPRIN1Q7Z2K8 1008 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TMCO2Q7Z6W1 182 aaPredicted RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CTAGE6Q86UF2 777 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 LRRC49Q8IUZ0 686 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 SCN4BQ8IWT1 228 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 UNC45BQ8IWX7 931 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CTAGE4Q8IX94 777 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 DEFB106AQ8N104 65 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 KREMEN2Q8NCW0 462 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 FAM172AQ8WUF8 416 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 SLC22A17Q8WUG5 538 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 ALG3Q92685 438 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 SLCO2A1Q92959 643 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 FBXO32Q969P5 355 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 FAF2Q96CS3 445 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 MRPL38Q96DV4 380 aaKnown RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 SEPT5Q99719 369 aaPredicted RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 FAM129AQ9BZQ8 928 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TRIM7Q9C029 511 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CRISPLD1Q9H336 500 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CYP4F11Q9HBI6 524 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 EVA1BQ9NVM1 165 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 ARHGEF38Q9NXL2 777 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TRPM5Q9NZQ8 1165 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TJP2Q9UDY2 1190 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 SLC12A6Q9UHW9 1150 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 PCDHB3Q9Y5E6 796 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 PLXNA4Q9HCM2 1894 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CXorf51AA0A1B0GTR3 108 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ZNF840PA6NDX5 716 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ENC1O14682 589 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ZNF197O14709 1029 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 NDC80O14777 642 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 GRM6O15303 877 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 NCAM2O15394 837 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 SLU7O95391 586 aaKnown RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 SEC24AO95486 1093 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 IGLV3-27P01718 113 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 LRG1P02750 347 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 SRGAP2BP0DMP2 458 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 HOXB8P17481 243 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 HOXC13P31276 330 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 L1CAMP32004 1257 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ADRA1BP35368 520 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ATP5C1P36542 298 aaKnown RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 PBX2P40425 430 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 CDKN2BP42772 138 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 FNTAP49354 379 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ARSEP51690 589 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ERVFC1P60507 584 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 LMNB2Q03252 620 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 DEUP1Q05D60 604 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 TAF10Q12962 218 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 KLF1Q13351 362 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 KCNC3Q14003 757 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 OCLNQ16625 522 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 DUSP6Q16828 381 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 DDR2Q16832 855 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 CCDC142Q17RM4 750 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 C2CD6Q53TS8 623 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ODF2Q5BJF6 829 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 HECTD3Q5T447 861 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 CCDC181Q5TID7 509 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 FAM109BQ6ICB4 259 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 CCDC70Q6NSX1 233 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 TRNP1Q6NT89 227 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 SYDE1Q6ZW31 735 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 BBS12Q6ZW61 710 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 CYP4V2Q6ZWL3 525 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 DNAJB7Q7Z6W7 309 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 SCD5Q86SK9 330 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 DDX42Q86XP3 938 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 DNAAF5Q86Y56 855 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 MMGT1Q8N4V1 131 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 LZTR1Q8N653 840 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 ARFGAP1Q8N6T3 406 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 EMC1Q8N766 993 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 C12orf50Q8NA57 414 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 SPATA4Q8NEY3 305 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 SCAMP5Q8TAC9 235 aa6.75□□□□□ -1.33
CDCA3-205ENST00000535871 DQX1Q8TE96 717 aaKnown RBP6.75□□□□□ -1.33
CDCA3-205ENST00000535871 PLD4Q96BZ4 506 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms