RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 SEMA3BQ13214 749 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 FUT11Q495W5 492 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 CBWD6Q4V339 395 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 DCAF17Q5H9S7 520 aaPredicted RBP21.58■■□□□ 1.05
LTBR-205ENST00000535739 CBWD3Q5JTY5 395 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 CBWD5Q5RIA9 395 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 TCERG1LQ5VWI1 586 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 UNQ6494/PRO21346Q6UXR6 183 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 PIP4P1Q86T03 277 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 OR2I1PQ8NGU4 316 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 SLC32A1Q9H598 525 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 THAP10Q9P2Z0 257 aaPredicted RBP21.58■■□□□ 1.05
LTBR-205ENST00000535739 STRIP2Q9ULQ0 834 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 CLEC4EQ9ULY5 219 aa21.58■■□□□ 1.05
LTBR-205ENST00000535739 SPEGQ15772 3267 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 IL12RB1P42701 662 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 SLC8A3P57103 927 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 GOLGA7BQ2TAP0 167 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 RABEPKQ7Z6M1 372 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 RGL4Q8IZJ4 473 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 HDDC3Q8N4P3 179 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 ZNF419Q96HQ0 510 aaPredicted RBP21.57■■□□□ 1.04
LTBR-205ENST00000535739 PIWIL1Q96J94 861 aaKnown RBP21.57■■□□□ 1.04
LTBR-205ENST00000535739 SCNM1Q9BWG6 230 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 ULBP1Q9BZM6 244 aa21.57■■□□□ 1.04
LTBR-205ENST00000535739 SPAARA0A1B0GVQ0 90 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 ARHGAP33O14559 1287 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 ZBED1O96006 694 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 PDE4CQ08493 712 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 STARD3Q14849 445 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 PM20D1Q6GTS8 502 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 BHLHA9Q7RTU4 235 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 MINDY1Q8N5J2 469 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 ADAM33Q9BZ11 813 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 MKRN2Q9H000 416 aaKnown RBP21.56■■□□□ 1.04
LTBR-205ENST00000535739 PRDM16Q9HAZ2 1276 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 TSPAN16Q9UKR8 245 aa21.56■■□□□ 1.04
LTBR-205ENST00000535739 NUMA1Q14980 2115 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 UPK3BL1B0FP48 263 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 UPK3BL2E5RIL1 263 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 OPHN1O60890 802 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 CYBBP04839 570 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 MAOBP27338 520 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 PMS1P54277 932 aaKnown RBP21.55■■□□□ 1.04
LTBR-205ENST00000535739 CUL2Q13617 745 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 ENPP2Q13822 863 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 ANKS1BQ7Z6G8 1248 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 CPXM2Q8N436 756 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 DDI1Q8WTU0 396 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 UCMAQ8WVF2 138 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 CCDC34Q96HJ3 373 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 FAM124BQ9H5Z6 455 aaPredicted RBP21.55■■□□□ 1.04
LTBR-205ENST00000535739 COQ4Q9Y3A0 265 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 KNL1Q8NG31 2342 aa21.55■■□□□ 1.04
LTBR-205ENST00000535739 XPO1O14980 1071 aaKnown RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 NPC1O15118 1278 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 CD6P30203 668 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 BCAT1P54687 386 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 SIM1P81133 766 aaPredicted RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 ZNF234Q14588 700 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 PLEKHG6Q3KR16 790 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 SGO2Q562F6 1265 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 SYCP2LQ5T4T6 812 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 ZNF658Q5TYW1 1059 aaPredicted RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 ANKRD40Q6AI12 368 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 METTL3Q86U44 580 aaKnown RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 FMNL3Q8IVF7 1028 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 FAM217AQ8IXS0 508 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 ZC3H3Q8IXZ2 948 aaKnown RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 FMR1NBQ8N0W7 255 aaPredicted RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 UBA3Q8TBC4 463 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 SORCS1Q8WY21 1168 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 PLD4Q96BZ4 506 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 TOE1Q96GM8 510 aaKnown RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 TSG101Q99816 390 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 TMEM121BQ9BXQ6 578 aaPredicted RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 LRRC4Q9HBW1 653 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 RMND1Q9NWS8 449 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 ELOVL2Q9NXB9 296 aa21.54■■□□□ 1.04
LTBR-205ENST00000535739 WSB2Q9NYS7 404 aaPredicted RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 USP36Q9P275 1121 aaKnown RBP21.54■■□□□ 1.04
LTBR-205ENST00000535739 DMXL2Q8TDJ6 3036 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 TRIM49BA6NDI0 452 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 KCNJ18B7U540 433 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 SLC16A3O15427 465 aaKnown RBP21.53■■□□□ 1.04
LTBR-205ENST00000535739 HYAL3O43820 417 aaPredicted RBP21.53■■□□□ 1.04
LTBR-205ENST00000535739 SYPP08247 313 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 CD19P15391 556 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 FKBP3Q00688 224 aaKnown RBP21.53■■□□□ 1.04
LTBR-205ENST00000535739 ADIGQ0VDE8 80 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 BST2Q10589 180 aaKnown RBP21.53■■□□□ 1.04
LTBR-205ENST00000535739 LRMPQ12912 555 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 TRIP4Q15650 581 aaPredicted RBP21.53■■□□□ 1.04
LTBR-205ENST00000535739 TMEM215Q68D42 235 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 TMPRSS6Q8IU80 811 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 RBBP8NLQ8NC74 664 aaPredicted RBP21.53■■□□□ 1.04
LTBR-205ENST00000535739 EDEM1Q92611 657 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 ERCC4Q92889 916 aaPredicted RBP21.53■■□□□ 1.04
LTBR-205ENST00000535739 FOXJ1Q92949 421 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 CIPCQ9C0C6 399 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms