RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 GOLGA8RI6L899 631 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 ALOX15BO15296 676 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 MSI1O43347 362 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 LTFP02788 710 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 BRAFP15056 766 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 ARL4AP40617 200 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 CRADDP78560 199 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 MTFR1Q15390 333 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 ATXN2LQ8WWM7 1075 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 TMEM109Q9BVC6 243 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 KCNK1O00180 336 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 PCSK1P29120 753 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 GRK4P32298 578 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 RAB27AP51159 221 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 STRADAQ7RTN6 431 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 METTL23Q86XA0 190 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 DBF4BQ8NFT6 615 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 SERPINB12Q96P63 405 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 PAIP2Q9BPZ3 127 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 TSPYL1Q9H0U9 437 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 WDR6Q9NNW5 1121 aaKnown RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 TBC1D13Q9NVG8 400 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 MAGED2Q9UNF1 606 aaPredicted RBP18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 TRIM17Q9Y577 477 aa18.92■□□□□ 0.62
HTATSF1-204ENST00000535601 C5orf42Q9H799 3197 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 A0A087WUV0 522 aaPredicted RBP18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 RASA4BC9J798 803 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 TRIM66O15016 1216 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 RASA4O43374 803 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 TRAPPC3O43617 180 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 PQBP1O60828 265 aaKnown RBP18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 NBNO60934 754 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 TGM2P21980 687 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 HOXD10P28358 340 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 RDXP35241 583 aaKnown RBP18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 KCNJ11Q14654 390 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 TNFAIP8L3Q5GJ75 292 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 MFSD5Q6N075 450 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 GLB1LQ6UWU2 654 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 MPP5Q8N3R9 675 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 KCTD13Q8WZ19 329 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 PGBD4Q96DM1 585 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 TSPAN18Q96SJ8 248 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 SIK2Q9H0K1 926 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 UNC93B1Q9H1C4 597 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 SFMBT1Q9UHJ3 866 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 VWA8A3KMH1 1905 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 KBTBD13C9JR72 458 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 GRIK1P39086 918 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 YWHAGP61981 247 aaKnown RBP eCLIP18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 DDR2Q16832 855 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 PALM2Q8IXS6 379 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 SLC2A13Q96QE2 648 aa18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 ROPN1BQ9BZX4 212 aaPredicted RBP18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 ROPN1Q9HAT0 212 aaPredicted RBP18.91■□□□□ 0.62
HTATSF1-204ENST00000535601 GMNCA6NCL1 334 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 FAM155BO75949 473 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 PDIK1LQ8N165 341 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 STAP1Q9ULZ2 295 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 IVLP07476 585 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 SRGAP2BP0DMP2 458 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 KRT15P19012 456 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 STIP1P31948 543 aaKnown RBP18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 YWHAHQ04917 246 aaPredicted RBP18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 GPNMBQ14956 572 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 TAC4Q86UU9 113 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 RNF34Q969K3 372 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 NLRC5Q86WI3 1866 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 EEF2KO00418 725 aaKnown RBP18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 F7P08709 466 aaPredicted RBP18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 CCL23P55773 120 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 SPARCL1Q14515 664 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 ZKSCAN8Q15776 578 aaPredicted RBP18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 SLC24A5Q71RS6 500 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 PRPF39Q86UA1 669 aaKnown RBP18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 DYDC1Q8WWB3 177 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 NT5C3BQ969T7 300 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 CELF6Q96J87 481 aaKnown RBP18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 RGS18Q9NS28 235 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 RABGEF1Q9UJ41 708 aa18.9■□□□□ 0.62
HTATSF1-204ENST00000535601 PTPRDP23468 1912 aa18.89■□□□□ 0.62
HTATSF1-204ENST00000535601 FRMPD3Q5JV73 1810 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 CDH16O75309 829 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 ADRA1BP35368 520 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 FAM171BQ6P995 826 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 NPWQ8N729 165 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 ACBD6Q9BR61 282 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 DNAI2Q9GZS0 605 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 TKTL2Q9H0I9 626 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 CYLDQ9NQC7 956 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 STAT4Q14765 748 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 SLC45A4Q5BKX6 768 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 NOMO2Q5JPE7 1267 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 EFHC2Q5JST6 749 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 RAB41Q5JT25 222 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 FAM26DQ5JW98 314 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 HEATR6Q6AI08 1181 aaKnown RBP18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 LRRC34Q8IZ02 419 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 UNC5BQ8IZJ1 945 aa18.89■□□□□ 0.61
HTATSF1-204ENST00000535601 PRDM12Q9H4Q4 367 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms