RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PKN2Q16513 984 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 HLA-DQA1Q5Y7H0 255 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 TFAP2DQ7Z6R9 452 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 SYTL1Q8IYJ3 562 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 KLHL20Q9Y2M5 609 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 GHRP10912 638 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 CXCL9Q07325 125 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 SLC27A1Q6PCB7 646 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 CSGALNACT1Q8TDX6 532 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 SMPD4Q9NXE4 827 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 TDRKHQ9Y2W6 561 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 CHD1O14646 1710 aa18.64■□□□□ 0.57
SFSWAP-203ENST00000535236 F8VZ95 297 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 CLTBP09497 229 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 ACAT1P24752 427 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 DSG1Q02413 1049 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 DSG4Q86SJ6 1040 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 RRAGCQ9HB90 399 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 BATF3Q9NR55 127 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 TSPAN16Q9UKR8 245 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 ATP6V1B1P15313 513 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 SERPINB3P29508 390 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 ADIGQ0VDE8 80 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 POU6F1Q14863 301 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 ACOX1Q15067 660 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 GSTA3Q16772 222 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 PPM1LQ5SGD2 360 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 CYP4Z2PQ8N1L4 340 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 PACSIN1Q9BY11 444 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 OSBPL6Q9BZF3 934 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 PARVBQ9HBI1 364 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 GEMIN8Q9NWZ8 242 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 UXTQ9UBK9 157 aaPredicted RBP18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 FBXL21Q9UKT6 434 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 SOX10P56693 466 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 CENPTQ96BT3 561 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 SERPINB11Q96P15 392 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 H0YC42 278 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 MPOP05164 745 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 GRK2P25098 689 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 IRAK1P51617 712 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 NDST1P52848 882 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 AQP5P55064 265 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 VPS33AQ96AX1 596 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 SEMA6BQ9H3T3 888 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 NDOR1Q9UHB4 597 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 RTN3O95197 1032 aaPredicted RBP18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 IGSF6O95976 241 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 CCNG2Q16589 344 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 PGLYRP2Q96PD5 576 aa18.63■□□□□ 0.57
SFSWAP-203ENST00000535236 CXCL11O14625 94 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 BAIAP3O94812 1187 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 CYP2A6P11509 494 aaPredicted RBP18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 RARGP13631 454 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 CD151P48509 253 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 TUBP50607 506 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 ERVK-24P63145 666 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 CDH17Q12864 832 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 NFIL3Q16649 462 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 TLK2Q86UE8 772 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 ABRAQ8N0Z2 381 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 OSCP1Q8WVF1 389 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 SPHKAPQ2M3C7 1700 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 ZNF7P17097 686 aaPredicted RBP18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 ATP6V1C1P21283 382 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 CCT8P50990 548 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 TAF2Q6P1X5 1199 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 TRAF7Q6Q0C0 670 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 SV2AQ7L0J3 742 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 ZDHHC17Q8IUH5 632 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 SOCS4Q8WXH5 440 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 AHCYL2Q96HN2 611 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 SH3BP4Q9P0V3 963 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 RAD51BO15315 384 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 CD44P16070 742 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 ATAD3BQ5T9A4 648 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 OLFML2BQ68BL8 750 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 REPS2Q8NFH8 660 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 DTNBP1Q96EV8 351 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 VTA1Q9NP79 307 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 SPG21Q9NZD8 308 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 AXLP30530 894 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 PKN1Q16512 942 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 CAMKK1Q8N5S9 505 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 DPY30Q9C005 99 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 NEXMIFQ5QGS0 1516 aa18.62■□□□□ 0.57
SFSWAP-203ENST00000535236 OR56A5P0C7T3 313 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 GRK4P32298 578 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 BOP1Q14137 746 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 MYBPC2Q14324 1141 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 KCTD14Q9BQ13 255 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 O00370 1275 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 KLHL41O60662 606 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 NFICP08651 508 aa18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-203ENST00000535236 TRAF2Q12933 501 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms