RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 STARD13Q9Y3M8 1113 aa10.59□□□□□ -0.71
CLSTN3-203ENST00000534830 GOLGA4Q13439 2230 aaKnown RBP10.59□□□□□ -0.71
CLSTN3-203ENST00000534830 PTPRBP23467 1997 aa10.59□□□□□ -0.71
CLSTN3-203ENST00000534830 TRIM49BA6NDI0 452 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 SGK1O00141 431 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 TULP3O75386 442 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 C1QL1O75973 258 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 RARGP13631 454 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 CD44P16070 742 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 BMP6P22004 513 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 HOXD12P35452 270 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 TIE1P35590 1138 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 PLA2G4AP47712 749 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 PSEN1P49768 467 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 LRRC63Q05C16 580 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 ZNF394Q53GI3 561 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 ZNF605Q86T29 641 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 ALLCQ8N6M5 410 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 ANKRD52Q8NB46 1076 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 TXNDC5Q8NBS9 432 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 HMGB4Q8WW32 186 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 SMARCE1Q969G3 411 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 SLC35C1Q96A29 364 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 P2RY11Q96G91 374 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 HEXIM2Q96MH2 286 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 CAPN10Q9HC96 672 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 ARHGEF4Q9NR80 690 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 CLIC5Q9NZA1 410 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 DNMT3LQ9UJW3 386 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 FBXO10Q9UK96 956 aa10.58□□□□□ -0.72
CLSTN3-203ENST00000534830 ARHGAP33O14559 1287 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 MDM4O15151 490 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 TRIM24O15164 1050 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 AP5Z1O43299 807 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 CACNG3O60359 315 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 STC2O76061 302 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 SMC2O95347 1197 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 KLF8O95600 359 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 SYPP08247 313 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 CISD3P0C7P0 127 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 IRF1P10914 325 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 KDSRQ06136 332 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 BYSLQ13895 437 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 MAP7D1Q3KQU3 841 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 PREPLQ4J6C6 727 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 PKDCCQ504Y2 493 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 SPDYCQ5MJ68 293 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 PEAR1Q5VY43 1037 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 PM20D1Q6GTS8 502 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 FOXR2Q6PJQ5 311 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 TOGARAM2Q6ZUX3 1019 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 BHLHA9Q7RTU4 235 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 RABEPKQ7Z6M1 372 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 NAXDQ8IW45 347 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 NAT16Q8N8M0 369 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 TERB1Q8NA31 727 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 JAKMIP2Q96AA8 810 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 TSG101Q99816 390 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 DNAI2Q9GZS0 605 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 POLMQ9NP87 494 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 DEC1Q9P2X7 70 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 NUDT5Q9UKK9 219 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 MAN1B1Q9UKM7 699 aa10.57□□□□□ -0.72
CLSTN3-203ENST00000534830 PCDH15Q96QU1 1955 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 TBC1D3BA6NDS4 549 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 GOLGA6L4A6NEF3 574 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 PPP1R3GB7ZBB8 358 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 TK2O00142 265 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 TULP2O00295 520 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 KLKB1P03952 638 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 TYRP14679 529 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 RPL6Q02878 288 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 SLC14A1Q13336 389 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 CUL2Q13617 745 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 ANO4Q32M45 955 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 DCAF17Q5H9S7 520 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 EOGTQ5NDL2 527 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 BTBD8Q5XKL5 378 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 TTI2Q6NXR4 508 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 TADA2BQ86TJ2 420 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 SLCO6A1Q86UG4 719 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 PIGZQ86VD9 579 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 MIB1Q86YT6 1006 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 LMO3Q8TAP4 145 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 CEP63Q96MT8 703 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 CDK5RAP1Q96SZ6 601 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 NACA2Q9H009 215 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 METTL14Q9HCE5 456 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 WDR35Q9P2L0 1181 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 ARMCX3Q9UH62 379 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 LSM7Q9UK45 103 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 RAI2Q9Y5P3 530 aa10.56□□□□□ -0.72
CLSTN3-203ENST00000534830 A0A087WV48 116 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms