RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 HECTD3Q5T447 861 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 SNX30Q5VWJ9 437 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 GRAMD4Q6IC98 578 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 SLC36A4Q6YBV0 504 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 SCARA5Q6ZMJ2 495 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 CCNI2Q6ZMN8 369 aaPredicted RBP7.53□□□□□ -1.2
GEN1-207ENST00000534669 TPGS1Q6ZTW0 290 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 NAXDQ8IW45 347 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 FUKQ8N0W3 1084 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 PDILTQ8N807 584 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 CEP76Q8TAP6 659 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 ADAMTS14Q8WXS8 1223 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 BHMTQ93088 406 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 ZNF419Q96HQ0 510 aaPredicted RBP7.53□□□□□ -1.2
GEN1-207ENST00000534669 MRGPRX1Q96LB2 322 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 ZNF396Q96N95 335 aaPredicted RBP7.53□□□□□ -1.2
GEN1-207ENST00000534669 SLITRK1Q96PX8 696 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 CGRRF1Q99675 332 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 GABRG3Q99928 467 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 NMUR1Q9HB89 426 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 AGPAT3Q9NRZ7 376 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 DNAJC17Q9NVM6 304 aaKnown RBP7.53□□□□□ -1.2
GEN1-207ENST00000534669 PLK2Q9NYY3 685 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 TBC1D14Q9P2M4 693 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 DEC1Q9P2X7 70 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 CCDC39Q9UFE4 941 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 NUDT5Q9UKK9 219 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 RAXQ9Y2V3 346 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 ASXL3Q9C0F0 2248 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 PLXNA2O75051 1894 aa7.53□□□□□ -1.2
GEN1-207ENST00000534669 URB1O60287 2271 aaKnown RBP7.53□□□□□ -1.2
GEN1-207ENST00000534669 A0A1W2PQD8 194 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 H0Y626 953 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 CYP26A1O43174 497 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 CACNG3O60359 315 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 TLR5O60602 858 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 TRIM16O95361 564 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 VNN1O95497 513 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 BMP2P12643 396 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 TYRP14679 529 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 TNNI1P19237 187 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 TNNC1P63316 161 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 KRT85P78386 507 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 ALCAMQ13740 583 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 BYSLQ13895 437 aaKnown RBP7.52□□□□□ -1.21
GEN1-207ENST00000534669 ZNF423Q2M1K9 1284 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 FUT11Q495W5 492 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 BTBD8Q5XKL5 378 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 KIAA1324Q6UXG2 1013 aaKnown RBP7.52□□□□□ -1.21
GEN1-207ENST00000534669 Q6ZVU0 165 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 HTR3DQ70Z44 454 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 ACOT1Q86TX2 421 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
GEN1-207ENST00000534669 NELFCDQ8IXH7 590 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 CHPFQ8IZ52 775 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 RGL4Q8IZJ4 473 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 ZCCHC9Q8N567 271 aaKnown RBP7.52□□□□□ -1.21
GEN1-207ENST00000534669 ZNF507Q8TCN5 953 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 SCFD1Q8WVM8 642 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
GEN1-207ENST00000534669 OVCA2Q8WZ82 227 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 OTUB2Q96DC9 234 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 DUSP9Q99956 384 aaKnown RBP7.52□□□□□ -1.21
GEN1-207ENST00000534669 MED10Q9BTT4 135 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 BBS2Q9BXC9 721 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 MKRN2Q9H000 416 aaKnown RBP7.52□□□□□ -1.21
GEN1-207ENST00000534669 KRT82Q9NSB4 513 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 EHD2Q9NZN4 543 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 PCOLCE2Q9UKZ9 415 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 CLEC4EQ9ULY5 219 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 BTBD3Q9Y2F9 522 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 FNDC3AQ9Y2H6 1198 aaKnown RBP7.52□□□□□ -1.21
GEN1-207ENST00000534669 ATP6V1DQ9Y5K8 247 aa7.52□□□□□ -1.21
GEN1-207ENST00000534669 SHROOM3Q8TF72 1996 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 HELZ2Q9BYK8 2649 aaKnown RBP7.51□□□□□ -1.21
GEN1-207ENST00000534669 LRRIQ3A6PVS8 624 aaPredicted RBP7.51□□□□□ -1.21
GEN1-207ENST00000534669 HHLA1C9JL84 531 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 RTN3O95197 1032 aaPredicted RBP7.51□□□□□ -1.21
GEN1-207ENST00000534669 YEATS4O95619 227 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 STAU1O95793 577 aaKnown RBP7.51□□□□□ -1.21
GEN1-207ENST00000534669 KLKB1P03952 638 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 ATXN1LP0C7T5 689 aaKnown RBP7.51□□□□□ -1.21
GEN1-207ENST00000534669 DPP6P42658 865 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 IL12RB1P42701 662 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 TUBP50607 506 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 MAP3K7CLP57077 242 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 DLG4P78352 724 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 EHHADHQ08426 723 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 SLC39A14Q15043 492 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 SURF1Q15526 300 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 GEN1Q17RS7 908 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 C6orf118Q5T5N4 469 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 SPOPLQ6IQ16 392 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 CCDC73Q6ZRK6 1079 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 TRMT11Q7Z4G4 463 aaKnown RBP7.51□□□□□ -1.21
GEN1-207ENST00000534669 CACUL1Q86Y37 369 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 CCDC65Q8IXS2 484 aa7.51□□□□□ -1.21
GEN1-207ENST00000534669 C12orf29Q8N999 325 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms