RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 MFAP3P55082 362 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 STX17P56962 302 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 RPL6Q02878 288 aaKnown RBP9.32□□□□□ -0.92
COPB1-211ENST00000534234 TRIP4Q15650 581 aaPredicted RBP9.32□□□□□ -0.92
COPB1-211ENST00000534234 CNGA2Q16280 664 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 TRIM61Q5EBN2 209 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 N4BP2L1Q5TBK1 243 aaPredicted RBP9.32□□□□□ -0.92
COPB1-211ENST00000534234 DAB2IPQ5VWQ8 1189 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 LYSMD4Q5XG99 296 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 FOXR2Q6PJQ5 311 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 SLC36A4Q6YBV0 504 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 RRAGAQ7L523 313 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 BHLHA9Q7RTU4 235 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 CPXM2Q8N436 756 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 DEFB119Q8N690 84 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 SLC35F5Q8WV83 523 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 KAT5Q92993 513 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 PLD4Q96BZ4 506 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 ZSWIM1Q9BR11 485 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 CD248Q9HCU0 757 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 TMEM9BQ9NQ34 198 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 CNGB3Q9NQW8 809 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 SFMBT1Q9UHJ3 866 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 CLEC4EQ9ULY5 219 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 HBS1LQ9Y450 684 aaKnown RBP9.32□□□□□ -0.92
COPB1-211ENST00000534234 STON1Q9Y6Q2 735 aa9.32□□□□□ -0.92
COPB1-211ENST00000534234 ATG2BQ96BY7 2078 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 SDK1Q7Z5N4 2213 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 PIK3R2O00459 728 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 CDX4O14627 284 aaPredicted RBP9.31□□□□□ -0.92
COPB1-211ENST00000534234 NPC1O15118 1278 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 TSPAN3O60637 253 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 GABBR2O75899 941 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 GNA14O95837 355 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 ITPKAP23677 461 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 RGS7P49802 495 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 DAOAP59103 153 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 KCNH2Q12809 1159 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 LMAN2Q12907 356 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 STARD3Q14849 445 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 STILQ15468 1287 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 GEN1Q17RS7 908 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 PMF1Q6P1K2 205 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 TRIM59Q8IWR1 403 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 SCML4Q8N228 414 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 UCMAQ8WVF2 138 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 PIWIL1Q96J94 861 aaKnown RBP9.31□□□□□ -0.92
COPB1-211ENST00000534234 MRGPRX1Q96LB2 322 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 SRRTQ9BXP5 876 aaKnown RBP9.31□□□□□ -0.92
COPB1-211ENST00000534234 NUSAP1Q9BXS6 441 aaKnown RBP9.31□□□□□ -0.92
COPB1-211ENST00000534234 SLC2A11Q9BYW1 496 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 SLC6A17Q9H1V8 727 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 ELOVL2Q9NXB9 296 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 THAP10Q9P2Z0 257 aaPredicted RBP9.31□□□□□ -0.92
COPB1-211ENST00000534234 EVLQ9UI08 416 aaPredicted RBP9.31□□□□□ -0.92
COPB1-211ENST00000534234 PILRBQ9UKJ0 227 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 CYP8B1Q9UNU6 501 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 CTNND2Q9UQB3 1225 aa9.31□□□□□ -0.92
COPB1-211ENST00000534234 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.31□□□□□ -0.92
COPB1-211ENST00000534234 IGHV1OR15-9A0A0B4J2B8 117 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 M0QYV0 167 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 TIMM44O43615 452 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 CALCAP01258 141 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 BRD2P25440 801 aaKnown RBP9.3□□□□□ -0.92
COPB1-211ENST00000534234 DPP6P42658 865 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 ZNF132P52740 706 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 GCNT1Q02742 428 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 ZNF33AQ06730 810 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 PAK1Q13153 545 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 E2F5Q15329 346 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 UAP1L1Q3KQV9 507 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 MPPE1Q53F39 396 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 ADGRF1Q5T601 910 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 SLC23A3Q6PIS1 610 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 ANKS1BQ7Z6G8 1248 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 FAM217AQ8IXS0 508 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 RBBP8NLQ8NC74 664 aaPredicted RBP9.3□□□□□ -0.92
COPB1-211ENST00000534234 IRGQQ8WZA9 623 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 TMA16Q96EY4 203 aaKnown RBP9.3□□□□□ -0.92
COPB1-211ENST00000534234 HSFY1Q96LI6 401 aa9.3□□□□□ -0.92
COPB1-211ENST00000534234 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.3□□□□□ -0.92
COPB1-211ENST00000534234 HELZP42694 1942 aaKnown RBP9.3□□□□□ -0.92
COPB1-211ENST00000534234 MSI1O43347 362 aaKnown RBP9.29□□□□□ -0.92
COPB1-211ENST00000534234 SYNCRIPO60506 623 aaKnown RBP9.29□□□□□ -0.92
COPB1-211ENST00000534234 NDUFS2O75306 463 aa9.29□□□□□ -0.92
COPB1-211ENST00000534234 AFPP02771 609 aaKnown RBP9.29□□□□□ -0.92
COPB1-211ENST00000534234 CFIP05156 583 aa9.29□□□□□ -0.92
COPB1-211ENST00000534234 HOXD12P35452 270 aa9.29□□□□□ -0.92
COPB1-211ENST00000534234 IL12RB1P42701 662 aa9.29□□□□□ -0.92
COPB1-211ENST00000534234 NOVA1P51513 510 aaKnown RBP9.29□□□□□ -0.92
COPB1-211ENST00000534234 MARSP56192 900 aaKnown RBP9.29□□□□□ -0.92
COPB1-211ENST00000534234 ZNF445P59923 1031 aa9.29□□□□□ -0.92
COPB1-211ENST00000534234 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
COPB1-211ENST00000534234 ENPP2Q13822 863 aa9.29□□□□□ -0.92
COPB1-211ENST00000534234 EIF4HQ15056 248 aaKnown RBP9.29□□□□□ -0.92
COPB1-211ENST00000534234 DUOXA1Q1HG43 343 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms