RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 BTBD3Q9Y2F9 522 aa15.7■□□□□ 0.1
CTSB-230ENST00000534149 SLCO1B1Q9Y6L6 691 aa15.7■□□□□ 0.1
CTSB-230ENST00000534149 FLRT2O43155 660 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 DKK1O94907 266 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 IGLV3-19P01714 112 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 CORO1AP31146 461 aaKnown RBP15.69■□□□□ 0.1
CTSB-230ENST00000534149 CSNK1EP49674 416 aaKnown RBP15.69■□□□□ 0.1
CTSB-230ENST00000534149 KIF11P52732 1056 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 ZACNQ401N2 412 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 ANKS1BQ7Z6G8 1248 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 C1orf216Q8TAB5 229 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 CYFIP2Q96F07 1278 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 PIWIL1Q96J94 861 aaKnown RBP15.69■□□□□ 0.1
CTSB-230ENST00000534149 CDC6Q99741 560 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 NUP58Q9BVL2 599 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 CIPCQ9C0C6 399 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 ZSCAN16Q9H4T2 348 aaPredicted RBP15.69■□□□□ 0.1
CTSB-230ENST00000534149 SCUBE2Q9NQ36 999 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 CLEC4EQ9ULY5 219 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 ZNF510Q9Y2H8 683 aa15.69■□□□□ 0.1
CTSB-230ENST00000534149 POLR2DO15514 142 aaKnown RBP15.68■□□□□ 0.1
CTSB-230ENST00000534149 STX6O43752 255 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 PPP6R2O75170 966 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 KIF20AO95235 890 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 ASS1P00966 412 aaKnown RBP15.68■□□□□ 0.1
CTSB-230ENST00000534149 RPN1P04843 607 aaKnown RBP15.68■□□□□ 0.1
CTSB-230ENST00000534149 EPHX1P07099 455 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 RALAP11233 206 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 CHKAP35790 457 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 PIK3CAP42336 1068 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 CYP4F3Q08477 520 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 CUL4BQ13620 913 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 DBX2Q6ZNG2 339 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 CCDC186Q7Z3E2 898 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 TADA2BQ86TJ2 420 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 GOLGA5Q8TBA6 731 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 MAGEF1Q9HAY2 307 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 PNPLA8Q9NP80 782 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 DMAC2Q9NW81 257 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 ELOVL2Q9NXB9 296 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 DKK4Q9UBT3 224 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.68■□□□□ 0.1
CTSB-230ENST00000534149 PCDHGB2Q9Y5G2 931 aa15.68■□□□□ 0.1
CTSB-230ENST00000534149 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 FAM149AA5PLN7 773 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 TRABD2BA6NFA1 517 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 CUTAO60888 179 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 HLA-DRAP01903 254 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 HLA-EP13747 358 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 TRIM21P19474 475 aaKnown RBP15.67■□□□□ 0.1
CTSB-230ENST00000534149 AFMP43652 599 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 PSEN1P49768 467 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 AFF3P51826 1226 aaKnown RBP15.67■□□□□ 0.1
CTSB-230ENST00000534149 COG7P83436 770 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 INCA1Q0VD86 236 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 KIF19Q2TAC6 998 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 TMEM215Q68D42 235 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 LAYNQ6UX15 382 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 SERPINA13PQ6UXR4 307 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 SV2AQ7L0J3 742 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 DENND1CQ8IV53 801 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 GRAMD1CQ8IYS0 662 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 RBBP8NLQ8NC74 664 aaPredicted RBP15.67■□□□□ 0.1
CTSB-230ENST00000534149 TAF4BQ92750 862 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 CRELD1Q96HD1 420 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 NT5C1AQ9BXI3 368 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 C6orf106Q9H6K1 298 aaPredicted RBP15.67■□□□□ 0.1
CTSB-230ENST00000534149 AGO1Q9UL18 857 aaKnown RBP15.67■□□□□ 0.1
CTSB-230ENST00000534149 SNX11Q9Y5W9 270 aa15.67■□□□□ 0.1
CTSB-230ENST00000534149 EIF4E1BA6NMX2 242 aaKnown RBP15.66■□□□□ 0.1
CTSB-230ENST00000534149 CYBBP04839 570 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 CD58P19256 250 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 ACSL1P33121 698 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 EIF4HQ15056 248 aaKnown RBP15.66■□□□□ 0.1
CTSB-230ENST00000534149 CCDC157Q569K6 752 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 C1orf220Q5T0J3 134 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 GALNT15Q8N3T1 639 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 ZNF276Q8N554 614 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 CDK5RAP1Q96SZ6 601 aaKnown RBP15.66■□□□□ 0.1
CTSB-230ENST00000534149 DCLK3Q9C098 648 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 APOBEC3GQ9HC16 384 aaKnown RBP15.66■□□□□ 0.1
CTSB-230ENST00000534149 CLIC5Q9NZA1 410 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 USP3Q9Y6I4 520 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 SETXQ7Z333 2677 aaKnown RBP15.66■□□□□ 0.1
CTSB-230ENST00000534149 KNTC1P50748 2209 aa15.66■□□□□ 0.1
CTSB-230ENST00000534149 TP53BP1Q12888 1972 aaPredicted RBP15.66■□□□□ 0.1
CTSB-230ENST00000534149 MUC22E2RYF6 1773 aaPredicted RBP15.65■□□□□ 0.1
CTSB-230ENST00000534149 KCNK3O14649 394 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 ARID5AQ03989 594 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 STK4Q13043 487 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 CAMK2BQ13554 666 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 SUZ12Q15022 739 aaKnown RBP15.65■□□□□ 0.1
CTSB-230ENST00000534149 PPP1R26Q5T8A7 1209 aaPredicted RBP15.65■□□□□ 0.1
CTSB-230ENST00000534149 CEP135Q66GS9 1140 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 SLC9A9Q8IVB4 645 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 ZNF366Q8N895 744 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 KIAA0895Q8NCT3 520 aa15.65■□□□□ 0.1
CTSB-230ENST00000534149 OR2T3Q8NH03 318 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms