RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	PROSER3	Q2NL68	480 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	SLC45A4	Q5BKX6	768 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	NEK10	Q6ZWH5	1172 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	GALNT5	Q7Z7M9	940 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	SLC15A3	Q8IY34	581 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	ABRA	Q8N0Z2	381 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	SDR16C5	Q8N3Y7	309 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	PPP2R3C	Q969Q6	453 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	RSPRY1	Q96DX4	576 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	FAM167B	Q9BTA0	163 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	FSD1L	Q9BXM9	530 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	SMURF2	Q9HAU4	748 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	HELLS	Q9NRZ9	838 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	GJB4	Q9NTQ9	266 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	STK32B	Q9NY57	414 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	COL20A1	Q9P218	1284 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	SERGEF	Q9UGK8	458 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	GABRQ	Q9UN88	632 aa		5.26	□□□□□ -1.57
ATM-223	ENST00000533979	PCF11	O94913	1555 aa	Known RBP	5.25	□□□□□ -1.57
ATM-223	ENST00000533979	HNRNPDL	O14979	420 aa	Known RBP	5.25	□□□□□ -1.57
ATM-223	ENST00000533979	CSF1R	P07333	972 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	XBP1	P17861	261 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	EN2	P19622	333 aa	Predicted RBP	5.25	□□□□□ -1.57
ATM-223	ENST00000533979	KCNA3	P22001	575 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	TUB	P50607	506 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	TUBA4A	P68366	448 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	KRTAP1-1	Q07627	177 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	PTK2B	Q14289	1009 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	PLA1A	Q53H76	456 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	LRCH2	Q5VUJ6	765 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	CCDC30	Q5VVM6	783 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	TANGO2	Q6ICL3	276 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	LIN54	Q6MZP7	749 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979		Q6ZWC4	215 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	CPO	Q8IVL8	374 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	CNPY4	Q8N129	248 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	LRRC71	Q8N4P6	559 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	NKAIN3	Q8N8D7	197 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	ABHD11	Q8NFV4	315 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	OSCP1	Q8WVF1	389 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	SOCS4	Q8WXH5	440 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.25	□□□□□ -1.57
ATM-223	ENST00000533979	PYM1	Q9BRP8	204 aa	Known RBP	5.25	□□□□□ -1.57
ATM-223	ENST00000533979	ZNF518B	Q9C0D4	1074 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	CXorf36	Q9H7Y0	433 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	A1CF	Q9NQ94	594 aa	Known RBP	5.25	□□□□□ -1.57
ATM-223	ENST00000533979	TM7SF3	Q9NS93	570 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	ANKEF1	Q9NU02	776 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	SH3BP4	Q9P0V3	963 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	AFF4	Q9UHB7	1163 aa	Known RBP	5.25	□□□□□ -1.57
ATM-223	ENST00000533979	ITGB1BP2	Q9UKP3	347 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	PAXBP1	Q9Y5B6	917 aa		5.25	□□□□□ -1.57
ATM-223	ENST00000533979	AQP12B	A6NM10	295 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979		F5H0A9	414 aa	Predicted RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	NPS	P0C0P6	89 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	ENG	P17813	658 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	CERS1	P27544	350 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	HOXD12	P35452	270 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	DCAF7	P61962	342 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	KRT17	Q04695	432 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	HNRNPA0	Q13151	305 aa	Known RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	SLC13A2	Q13183	592 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	RAB32	Q13637	225 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	TIGD6	Q17RP2	521 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	ZIK1	Q3SY52	487 aa	Predicted RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	MOGAT3	Q86VF5	341 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	IZUMO1	Q8IYV9	350 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	LSMEM1	Q8N8F7	131 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	CYP2W1	Q8TAV3	490 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	FAM71B	Q8TC56	605 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	STT3B	Q8TCJ2	826 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	SPPL3	Q8TCT6	385 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	XAGE5	Q8WWM1	108 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	HERVK_113	Q902F9	699 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	DDB2	Q92466	427 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	NMD3	Q96D46	503 aa	Known RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	IQCD	Q96DY2	449 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	TREX2	Q9BQ50	279 aa	Predicted RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	THAP7	Q9BT49	309 aa	Predicted RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	C1QTNF7	Q9BXJ2	289 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	AP1M1	Q9BXS5	423 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	SLC29A3	Q9BZD2	475 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	JMJD4	Q9H9V9	463 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	ADAMTS5	Q9UNA0	930 aa		5.24	□□□□□ -1.57
ATM-223	ENST00000533979	TDRD9	Q8NDG6	1382 aa	Known RBP	5.24	□□□□□ -1.57
ATM-223	ENST00000533979	PRDM2	Q13029	1718 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	PLOD3	O60568	738 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	HSPA1L	P34931	641 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	ADD2	P35612	726 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	CLCN2	P51788	898 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	NR1H2	P55055	460 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	ZBED6	P86452	979 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	TLE2	Q04725	743 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	EFR3A	Q14156	821 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	C3orf38	Q5JPI3	329 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	PRAMEF17	Q5VTA0	474 aa		5.23	□□□□□ -1.57
ATM-223	ENST00000533979	RINL	Q6ZS11	566 aa		5.23	□□□□□ -1.57

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