RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TEAD4Q15561 434 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 DUOXA2Q1HG44 320 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 TAF1BQ53T94 588 aaPredicted RBP12.96□□□□□ -0.33
SVIP-205ENST00000533774 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 MCTP1Q6DN14 999 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 GPRIN1Q7Z2K8 1008 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 BAP1Q92560 729 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 TSC1Q92574 1164 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 TMEM176AQ96HP8 235 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 CNDP2Q96KP4 475 aaKnown RBP12.96□□□□□ -0.33
SVIP-205ENST00000533774 HNRNPABQ99729 332 aaKnown RBP12.96□□□□□ -0.33
SVIP-205ENST00000533774 NACA2Q9H009 215 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 NMUR1Q9HB89 426 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.33
SVIP-205ENST00000533774 B8ZZF3 427 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 SYNCRIPO60506 623 aaKnown RBP12.95□□□□□ -0.34
SVIP-205ENST00000533774 PRPF6O94906 941 aaKnown RBP12.95□□□□□ -0.34
SVIP-205ENST00000533774 LDOC1O95751 146 aaPredicted RBP12.95□□□□□ -0.34
SVIP-205ENST00000533774 WNT1P04628 370 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 EPHX1P07099 455 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 ACADMP11310 421 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 ZNF132P52740 706 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 KCNC4Q03721 635 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 KCNH2Q12809 1159 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 ORC1Q13415 861 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 WDR72Q3MJ13 1102 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 SYCP3Q8IZU3 236 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 FUKQ8N0W3 1084 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 ZNF366Q8N895 744 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 GZF1Q9H116 711 aaPredicted RBP12.95□□□□□ -0.34
SVIP-205ENST00000533774 SMYD3Q9H7B4 428 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 EBF2Q9HAK2 575 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 CPNE5Q9HCH3 593 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 DMAP1Q9NPF5 467 aaPredicted RBP12.95□□□□□ -0.34
SVIP-205ENST00000533774 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 ELOVL2Q9NXB9 296 aa12.95□□□□□ -0.34
SVIP-205ENST00000533774 COL27A1Q8IZC6 1860 aaPredicted RBP12.94□□□□□ -0.34
SVIP-205ENST00000533774 CYP26A1O43174 497 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 AP1G2O75843 785 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 STC2O76061 302 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 FSBPO95073 299 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 SEMA4FO95754 770 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 IGHV4-34P06331 123 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 FAM163BP0C2L3 166 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 CD27P26842 260 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 HOXD13P35453 343 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 ATP5C1P36542 298 aaKnown RBP12.94□□□□□ -0.34
SVIP-205ENST00000533774 CAMK2GQ13555 558 aaPredicted RBP12.94□□□□□ -0.34
SVIP-205ENST00000533774 TBC1D25Q3MII6 688 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 WDR49Q8IV35 697 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 EID2Q8N6I1 236 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 ENGASEQ8NFI3 743 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 OR2T3Q8NH03 318 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 SAP25Q8TEE9 199 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 TTC9Q92623 222 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 WBP1Q96G27 269 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 NAF1Q96HR8 494 aaKnown RBP12.94□□□□□ -0.34
SVIP-205ENST00000533774 EPSTI1Q96J88 318 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 SDCBP2Q9H190 292 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 XYLT2Q9H1B5 865 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 LHX5Q9H2C1 402 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.341e-8■■■■■ 149.1
SVIP-205ENST00000533774 KRT82Q9NSB4 513 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
SVIP-205ENST00000533774 LSM7Q9UK45 103 aaKnown RBP12.94□□□□□ -0.34
SVIP-205ENST00000533774 R3HCC1Q9Y3T6 440 aaKnown RBP12.94□□□□□ -0.34
SVIP-205ENST00000533774 CAPN8A6NHC0 703 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 ZNF233A6NK53 670 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 HHLA1C9JL84 531 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 WNT9AO14904 365 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 NPC1O15118 1278 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 WISP1O95388 367 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 C1SP09871 688 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 CCDC130P13994 396 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 MYL6P60660 151 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 ARHGAP40Q5TG30 622 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 RASSF8Q8NHQ8 419 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 SMARCD1Q96GM5 515 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 SLC6A18Q96N87 628 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 TLR8Q9NR97 1041 aaKnown RBP12.93□□□□□ -0.34
SVIP-205ENST00000533774 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
SVIP-205ENST00000533774 NXF1Q9UBU9 619 aaKnown RBP12.93□□□□□ -0.34
SVIP-205ENST00000533774 UBR5O95071 2799 aaPredicted RBP12.92□□□□□ -0.34
SVIP-205ENST00000533774 A0A1W2PQH9 124 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 FRMD3A2A2Y4 597 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 VILLO15195 856 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 C6P13671 934 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 GAP43P17677 238 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 ACTN2P35609 894 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 LONP1P36776 959 aaKnown RBP12.92□□□□□ -0.34
SVIP-205ENST00000533774 MAP3K7CLP57077 242 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 RPS14P62263 151 aaKnown RBP12.92□□□□□ -0.34
SVIP-205ENST00000533774 TNNC1P63316 161 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 RHDQ02161 417 aa12.92□□□□□ -0.34
SVIP-205ENST00000533774 BNIP3Q12983 259 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms