RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FLNBO75369 2602 aaKnown RBP9.17□□□□□ -0.94
COPB1-210ENST00000533533 GCN1Q92616 2671 aaKnown RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 SPAARA0A1B0GVQ0 90 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 HOXC11O43248 304 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 CILPO75339 1184 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 TULP3O75386 442 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 AP1G2O75843 785 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 LETM1O95202 739 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 CFIP05156 583 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 SERPINF2P08697 491 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 CD19P15391 556 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 TBXAS1P24557 533 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 ATXN3P54252 364 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 MCCD1P59942 119 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 SIM1P81133 766 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 MYL5Q02045 173 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 RPL6Q02878 288 aaKnown RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 GFPT1Q06210 699 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 INCA1Q0VD86 236 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 COL9A2Q14055 689 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 EXOC3L4Q17RC7 722 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 DUOXA1Q1HG43 343 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 SKOR2Q2VWA4 1001 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 VWA3BQ502W6 1294 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 TCP11X2Q5H9J9 407 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 HECTD3Q5T447 861 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 SNX30Q5VWJ9 437 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 BTBD8Q5XKL5 378 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 SLC36A4Q6YBV0 504 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 GBP6Q6ZN66 633 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 TRMT11Q7Z4G4 463 aaKnown RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 FAM35AQ86V20 835 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 ARHGEF19Q8IW93 802 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 HDDC3Q8N4P3 179 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 TTC39CQ8N584 583 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 AOPEPQ8N6M6 819 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 NAT16Q8N8M0 369 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 ANKRD20A12PQ8NF67 263 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 SCAMP5Q8TAC9 235 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 CEP76Q8TAP6 659 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 ZCCHC14Q8WYQ9 949 aaKnown RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 CYFIP2Q96F07 1278 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 TMEM176AQ96HP8 235 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 KCNK16Q96T55 309 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 VPS16Q9H269 839 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 CAPN10Q9HC96 672 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 UBE2TQ9NPD8 197 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 SPHK2Q9NRA0 654 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 KRT82Q9NSB4 513 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 FANCLQ9NW38 375 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 DEC1Q9P2X7 70 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 CHORDC1Q9UHD1 332 aaPredicted RBP9.16□□□□□ -0.94
COPB1-210ENST00000533533 SLC6A14Q9UN76 642 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 MSRB2Q9Y3D2 182 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 SH3BP1Q9Y3L3 701 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 LOC400499M0QZD8 3231 aa9.16□□□□□ -0.94
COPB1-210ENST00000533533 PLXNB3Q9ULL4 1909 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 A0A1W2PQF6 199 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 BECN2A8MW95 431 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 H0Y626 953 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 OPHN1O60890 802 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 TRIM16O95361 564 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 ZDHHC11BP0C7U3 371 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 FAM200BP0CF97 657 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 KRT5P13647 590 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 HOXB3P14651 431 aaPredicted RBP9.15□□□□□ -0.94
COPB1-210ENST00000533533 HOXB2P14652 356 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 GABRG2P18507 467 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 SLC9A1P19634 815 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 EEF1GP26641 437 aaKnown RBP9.15□□□□□ -0.94
COPB1-210ENST00000533533 NTSR1P30989 418 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 USP8P40818 1118 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 TUBP50607 506 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 SLC5A3P53794 718 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 MAP3K7CLP57077 242 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 ZNF33AQ06730 810 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 ARHGAP44Q17R89 818 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 ANO4Q32M45 955 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 C10orf76Q5T2E6 689 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 TMEM270Q6UE05 265 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 RABEPKQ7Z6M1 372 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 TMEM25Q86YD3 366 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 MIB1Q86YT6 1006 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 BBS7Q8IWZ6 715 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 FUKQ8N0W3 1084 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 CRYBG2Q8N1P7 616 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 DEFB119Q8N690 84 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 TERB1Q8NA31 727 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 KAT5Q92993 513 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 SMARCD1Q96GM5 515 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 FAXDC2Q96IV6 333 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.94
COPB1-210ENST00000533533 GTPBP2Q9BX10 602 aaKnown RBP9.15□□□□□ -0.94
COPB1-210ENST00000533533 NDST4Q9H3R1 872 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 CCSER2Q9H7U1 834 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 DMAP1Q9NPF5 467 aaPredicted RBP9.15□□□□□ -0.94
COPB1-210ENST00000533533 FSCN3Q9NQT6 498 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 IL37Q9NZH6 218 aa9.15□□□□□ -0.94
COPB1-210ENST00000533533 CALCOCO1Q9P1Z2 691 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms