RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 DAOAP59103 153 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 TRIP4Q15650 581 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-211ENST00000533492 STPG1Q5TH74 334 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 FYB2Q5VWT5 728 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 PMF1Q6P1K2 205 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 TMEFF1Q8IYR6 380 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 SCML4Q8N228 414 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 IPO4Q8TEX9 1081 aaKnown RBP16.14■□□□□ 0.17
CPSF1-211ENST00000533492 UCMAQ8WVF2 138 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 PIGKQ92643 395 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 HSFY1Q96LI6 401 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 INTS2Q9H0H0 1204 aaKnown RBP16.14■□□□□ 0.17
CPSF1-211ENST00000533492 UBE2TQ9NPD8 197 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-211ENST00000533492 RXFP3Q9NSD7 469 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 RWDD2AQ9UIY3 292 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 SLC27A6Q9Y2P4 619 aa16.14■□□□□ 0.17
CPSF1-211ENST00000533492 SPTBN2O15020 2390 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 NUP205Q92621 2012 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 A0A1W2PQF6 199 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 GFRA2O00451 464 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 KHNYNO15037 678 aaKnown RBP16.13■□□□□ 0.17
CPSF1-211ENST00000533492 CALCAP01258 141 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 GABRG2P18507 467 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 MFAP3P55082 362 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 E2F5Q15329 346 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 MAP7D1Q3KQU3 841 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 PPM1JQ5JR12 505 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 RNF43Q68DV7 783 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 TCEAL6Q6IPX3 200 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 FRMD1Q8N878 549 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 IRGQQ8WZA9 623 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 TCEAL3Q969E4 200 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 ERLEC1Q96DZ1 483 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 GABRG3Q99928 467 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 CACNA2D2Q9NY47 1150 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 RAD54BQ9Y620 910 aa16.13■□□□□ 0.17
CPSF1-211ENST00000533492 FBXO21O94952 628 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 STARD3Q14849 445 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 TPD52L1Q16890 204 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-211ENST00000533492 GEN1Q17RS7 908 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 MPPE1Q53F39 396 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 SPDYCQ5MJ68 293 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 KIAA1211LQ6NV74 962 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 SLC36A4Q6YBV0 504 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 ARMCX6Q7L4S7 300 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 ANKS1BQ7Z6G8 1248 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 P2RY11Q96G91 374 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 KREMEN1Q96MU8 473 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 SLC2A11Q9BYW1 496 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 MIS12Q9H081 205 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 ST7Q9NRC1 585 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 CALCOCO1Q9P1Z2 691 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 MBD1Q9UIS9 605 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-211ENST00000533492 STON1Q9Y6Q2 735 aa16.12■□□□□ 0.17
CPSF1-211ENST00000533492 GON4LQ3T8J9 2241 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 WASH3PC4AMC7 463 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 NPC1O15118 1278 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 AP5Z1O43299 807 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 MSI1O43347 362 aaKnown RBP16.11■□□□□ 0.17
CPSF1-211ENST00000533492 MED7O43513 233 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 TSPAN3O60637 253 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 ZNF217O75362 1048 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 LTFP02788 710 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 ZNF132P52740 706 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 ZNF445P59923 1031 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 RPL6Q02878 288 aaKnown RBP16.11■□□□□ 0.17
CPSF1-211ENST00000533492 ARID5AQ03989 594 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 ADGRF1Q5T601 910 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 ENOSF1Q7L5Y1 443 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 UNC45BQ8IWX7 931 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 FAM217AQ8IXS0 508 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 MLKLQ8NB16 471 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 TMA16Q96EY4 203 aaKnown RBP16.11■□□□□ 0.17
CPSF1-211ENST00000533492 FAM81BQ96LP2 452 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 EDEM2Q9BV94 578 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 THAP10Q9P2Z0 257 aaPredicted RBP16.11■□□□□ 0.17
CPSF1-211ENST00000533492 CNTN6Q9UQ52 1028 aa16.11■□□□□ 0.17
CPSF1-211ENST00000533492 TIMM44O43615 452 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 SYNCRIPO60506 623 aaKnown RBP16.1■□□□□ 0.17
CPSF1-211ENST00000533492 GABBR2O75899 941 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 LETM1O95202 739 aaPredicted RBP16.1■□□□□ 0.17
CPSF1-211ENST00000533492 LATS1O95835 1130 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 NCAM1P13591 858 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 NDUFV2P19404 249 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 USP8P40818 1118 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 DPP6P42658 865 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 PTGER3P43115 390 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 ACADSBP45954 432 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 MTIF2P46199 727 aaKnown RBP16.1■□□□□ 0.17
CPSF1-211ENST00000533492 EIF4HQ15056 248 aaKnown RBP16.1■□□□□ 0.17
CPSF1-211ENST00000533492 LYSMD4Q5XG99 296 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 MSANTD2Q6P1R3 559 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 KIAA1324Q6UXG2 1013 aaKnown RBP16.1■□□□□ 0.17
CPSF1-211ENST00000533492 GBP6Q6ZN66 633 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 SCUBE3Q8IX30 993 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 DEFB119Q8N690 84 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 CLEC4CQ8WTT0 213 aa16.1■□□□□ 0.17
CPSF1-211ENST00000533492 PIWIL1Q96J94 861 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms