RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CCDC33Q8N5R6 958 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 TXNDC5Q8NBS9 432 aaKnown RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 SLC4A5Q9BY07 1137 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 MIS12Q9H081 205 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 POLMQ9NP87 494 aaPredicted RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 POLR3BQ9NW08 1133 aaPredicted RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 FANCLQ9NW38 375 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 SFMBT1Q9UHJ3 866 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 FBXO10Q9UK96 956 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 CFAP54Q96N23 3096 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 PES1O00541 588 aaKnown RBP17.37■□□□□ 0.37
PKP3-209ENST00000533069 CBFA2T2O43439 604 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 ALDH1A2O94788 518 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 RING1Q06587 406 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 PDCLQ13371 301 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 LPAL2Q16609 132 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 FYB2Q5VWT5 728 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 NUGGCQ68CJ6 796 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 TMEM110Q86TL2 294 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 RASSF3Q86WH2 238 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 KIAA2013Q8IYS2 634 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 ZNF513Q8N8E2 541 aaPredicted RBP17.37■□□□□ 0.37
PKP3-209ENST00000533069 CLEC4CQ8WTT0 213 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 ACP6Q9NPH0 428 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 STOML2Q9UJZ1 356 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 PCDHGC3Q9UN70 934 aa17.37■□□□□ 0.37
PKP3-209ENST00000533069 SGK1O00141 431 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 TRIM24O15164 1050 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 LRP3O75074 770 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 CISD3P0C7P0 127 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 BPIFB4P59827 614 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 NNTQ13423 1086 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 FILIP1LQ4L180 1135 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 MPPE1Q53F39 396 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 EMC10Q5UCC4 262 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 ANO7Q6IWH7 933 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 C11orf74Q86VG3 221 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 UNC45BQ8IWX7 931 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 SCUBE3Q8IX30 993 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 FAM71AQ8IYT1 594 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 BHMTQ93088 406 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 FAM149B1Q96BN6 582 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 LOXL4Q96JB6 756 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 SERPINB11Q96P15 392 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 NOX5Q96PH1 765 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 IRX2Q9BZI1 471 aaPredicted RBP17.36■□□□□ 0.37
PKP3-209ENST00000533069 LHX5Q9H2C1 402 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 PLK2Q9NYY3 685 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 AJAP1Q9UKB5 411 aaPredicted RBP17.36■□□□□ 0.37
PKP3-209ENST00000533069 SLC27A6Q9Y2P4 619 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 OTOGLQ3ZCN5 2332 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 FAM186AA6NE01 2351 aa17.36■□□□□ 0.37
PKP3-209ENST00000533069 KIAA1549LQ6ZVL6 1849 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 GPR179Q6PRD1 2367 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 ANTXRLA6NF34 631 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 LRRC10BA6NIK2 292 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 E5RJQ4 531 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 FOXN3O00409 490 aaPredicted RBP17.35■□□□□ 0.37
PKP3-209ENST00000533069 MSI1O43347 362 aaKnown RBP17.35■□□□□ 0.37
PKP3-209ENST00000533069 IGLV3-27P01718 113 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 NCAM1P13591 858 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 SNX16P57768 344 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 E2F5Q15329 346 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 USP39Q53GS9 565 aaKnown RBP17.35■□□□□ 0.37
PKP3-209ENST00000533069 KLHDC7AQ5VTJ3 777 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 DPY19L2P1Q6NXN4 242 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 FAM160A2Q8N612 972 aaPredicted RBP17.35■□□□□ 0.37
PKP3-209ENST00000533069 SLC2A11Q9BYW1 496 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 TAB2Q9NYJ8 693 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 LIMA1Q9UHB6 759 aaKnown RBP17.35■□□□□ 0.37
PKP3-209ENST00000533069 CYTH4Q9UIA0 394 aa17.35■□□□□ 0.37
PKP3-209ENST00000533069 PRRT4C9JH25 899 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 PAPSS1O43252 624 aaPredicted RBP17.34■□□□□ 0.37
PKP3-209ENST00000533069 ADAM23O75077 832 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 SERPINC1P01008 464 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 FYNP06241 537 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 NTSR1P30989 418 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 KRT9P35527 623 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 SLC11A2P49281 568 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 TBX4P57082 545 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 KCNMA1Q12791 1236 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 RAPGEF1Q13905 1077 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 ADGRF1Q5T601 910 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 SDE2Q6IQ49 451 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 TMEM92Q6UXU6 159 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 TOGARAM2Q6ZUX3 1019 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 MDGA1Q8NFP4 955 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 DQX1Q8TE96 717 aaKnown RBP17.34■□□□□ 0.37
PKP3-209ENST00000533069 DDI1Q8WTU0 396 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 AZIN2Q96A70 460 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 P2RY11Q96G91 374 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 ZC3H10Q96K80 434 aaKnown RBP17.34■□□□□ 0.37
PKP3-209ENST00000533069 POPDC2Q9HBU9 364 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 PLCB1Q9NQ66 1216 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 CEP83Q9Y592 693 aa17.34■□□□□ 0.37
PKP3-209ENST00000533069 GFRA2O00451 464 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 CAPN9O14815 690 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 NPC1O15118 1278 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 IRAK2O43187 625 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms