RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 SCAND2PQ9GZW5 306 aaPredicted RBP17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 MARCH2Q9P0N8 246 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 ZNF510Q9Y2H8 683 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 CKAP5Q14008 2032 aa17.91■□□□□ 0.46
RPUSD4-207ENST00000532800 SLC12A8A0AV02 714 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 CETN3O15182 167 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 CHKAP35790 457 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 TKTL1P51854 596 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 GOLGA7BQ2TAP0 167 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 HDDC3Q8N4P3 179 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 ANKRD52Q8NB46 1076 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 ZNF419Q96HQ0 510 aaPredicted RBP17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 DCLK3Q9C098 648 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 MKRN2Q9H000 416 aaKnown RBP17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 SLC32A1Q9H598 525 aa17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 THAP10Q9P2Z0 257 aaPredicted RBP17.9■□□□□ 0.46
RPUSD4-207ENST00000532800 HYAL3O43820 417 aaPredicted RBP17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 NDUFS2O75306 463 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 MAOBP27338 520 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 PRCPP42785 496 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 FAM193AP78312 1265 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 PDE4CQ08493 712 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 STARD3Q14849 445 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 TCERG1LQ5VWI1 586 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 RGL4Q8IZJ4 473 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 ARHGAP18Q8N392 663 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 TTC39CQ8N584 583 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 SORCS1Q8WY21 1168 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 PIWIL1Q96J94 861 aaKnown RBP17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 UBXN6Q9BZV1 441 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 PRDM16Q9HAZ2 1276 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 RALYQ9UKM9 306 aaKnown RBP17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 TSPAN16Q9UKR8 245 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 STRIP2Q9ULQ0 834 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 SPEGQ15772 3267 aa17.89■□□□□ 0.45
RPUSD4-207ENST00000532800 UPK3BL1B0FP48 263 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 KCNJ18B7U540 433 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 UPK3BL2E5RIL1 263 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 ARHGAP33O14559 1287 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 STX10O60499 249 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 OPHN1O60890 802 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 ZBED1O96006 694 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 PRKCHP24723 683 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 CD6P30203 668 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 PMS1P54277 932 aaKnown RBP17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 SIM1P81133 766 aaPredicted RBP17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 ENPP2Q13822 863 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 ZNF234Q14588 700 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 PLEKHG6Q3KR16 790 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 TMEM215Q68D42 235 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 PM20D1Q6GTS8 502 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 ANKS1BQ7Z6G8 1248 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 RABEPKQ7Z6M1 372 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 CACUL1Q86Y37 369 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 CPXM2Q8N436 756 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 RBBP8NLQ8NC74 664 aaPredicted RBP17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 GATA6Q92908 595 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 TOE1Q96GM8 510 aaKnown RBP17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 USP36Q9P275 1121 aaKnown RBP17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 ZMIZ1Q9ULJ6 1067 aa17.88■□□□□ 0.45
RPUSD4-207ENST00000532800 MUC22E2RYF6 1773 aaPredicted RBP17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 XPO1O14980 1071 aaKnown RBP17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 CYBBP04839 570 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 CD59P13987 128 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 BCAT1P54687 386 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 ADIGQ0VDE8 80 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 CUL2Q13617 745 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 TRIP4Q15650 581 aaPredicted RBP17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 FMNL3Q8IVF7 1028 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 FAM217AQ8IXS0 508 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 ZC3H3Q8IXZ2 948 aaKnown RBP17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 DDI1Q8WTU0 396 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 UCMAQ8WVF2 138 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 ERCC4Q92889 916 aaPredicted RBP17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 PLD4Q96BZ4 506 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 GPR174Q9BXC1 333 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 CIPCQ9C0C6 399 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 ELOVL2Q9NXB9 296 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 WSB2Q9NYS7 404 aaPredicted RBP17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 SFMBT1Q9UHJ3 866 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 COQ4Q9Y3A0 265 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 ATP6V1DQ9Y5K8 247 aa17.87■□□□□ 0.45
RPUSD4-207ENST00000532800 TRIM49BA6NDI0 452 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 SLC16A3O15427 465 aaKnown RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 TSPAN3O60637 253 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 SYPP08247 313 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 CD19P15391 556 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 HOXD9P28356 352 aaPredicted RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 COPAP53621 1224 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 SLC8A3P57103 927 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 BST2Q10589 180 aaKnown RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 LRMPQ12912 555 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 SGO2Q562F6 1265 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 SYCP2LQ5T4T6 812 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 ZNF658Q5TYW1 1059 aaPredicted RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 ANKRD40Q6AI12 368 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 METTL3Q86U44 580 aaKnown RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 TMPRSS6Q8IU80 811 aa17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 FMR1NBQ8N0W7 255 aaPredicted RBP17.86■□□□□ 0.45
RPUSD4-207ENST00000532800 UBR7Q8N806 425 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms